Cluster: HRGMv2_0159_CGC56
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0159
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0159_12 | HRGMv2_0159_12_8 | 7846 | 9951 | + | GH88 |
| NULL(UNKNOWN) | HRGMv2_0159_12 | HRGMv2_0159_12_9 | 10010 | 11020 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0159_12 | HRGMv2_0159_12_10 | 11406 | 12827 | + | PL9 |
| pfam | HRGMv2_0159_12 | HRGMv2_0159_12_11 | 12868 | 14556 | + | Big_2 | Big_2 | Flg_new | Flg_new |
| CAZyme | HRGMv2_0159_12 | HRGMv2_0159_12_12 | 14720 | 16696 | + | GH164 |
| TC | HRGMv2_0159_12 | HRGMv2_0159_12_13 | 16896 | 20090 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0159_12 | HRGMv2_0159_12_14 | 20112 | 21929 | + | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0159_12 | HRGMv2_0159_12_15 | 21969 | 24725 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0159_12 | HRGMv2_0159_12_16 | 24747 | 26465 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | HRGMv2_0159_12 | HRGMv2_0159_12_17 | 26488 | 27399 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0159_12 | HRGMv2_0159_12_18 | 27522 | 29339 | + | CBM85 | GH10 |
Gene ID: HRGMv2_0159_12_8
Type: CAZyme
Location: 7846 - 9951 (+)
Type: CAZyme
Location: 7846 - 9951 (+)
Gene ID: HRGMv2_0159_12_9
Type:
Location: 10010 - 11020 (+)
Type:
Location: 10010 - 11020 (+)
Gene ID: HRGMv2_0159_12_10
Type: CAZyme
Location: 11406 - 12827 (+)
Type: CAZyme
Location: 11406 - 12827 (+)
Gene ID: HRGMv2_0159_12_11
Type: pfam
Location: 12868 - 14556 (+)
Type: pfam
Location: 12868 - 14556 (+)
Gene ID: HRGMv2_0159_12_12
Type: CAZyme
Location: 14720 - 16696 (+)
Type: CAZyme
Location: 14720 - 16696 (+)
Gene ID: HRGMv2_0159_12_13
Type: TC
Location: 16896 - 20090 (+)
Type: TC
Location: 16896 - 20090 (+)
Gene ID: HRGMv2_0159_12_14
Type: pfam
Location: 20112 - 21929 (+)
Type: pfam
Location: 20112 - 21929 (+)
Gene ID: HRGMv2_0159_12_15
Type: TC
Location: 21969 - 24725 (+)
Type: TC
Location: 21969 - 24725 (+)
Gene ID: HRGMv2_0159_12_16
Type: pfam
Location: 24747 - 26465 (+)
Type: pfam
Location: 24747 - 26465 (+)
Gene ID: HRGMv2_0159_12_17
Type:
Location: 26488 - 27399 (+)
Type:
Location: 26488 - 27399 (+)
Gene ID: HRGMv2_0159_12_18
Type: CAZyme
Location: 27522 - 29339 (+)
Type: CAZyme
Location: 27522 - 29339 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.