PROTEIN: HRGMv2_0159_12_9
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Protein File & Metadata
Source:
HRGMv2_0159_12_9.pdb
Genome ID:
Protein ID:
HRGMv2_0159_12_9
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Protein Sequence
MKCNTFFFLF LFSLPTIAVG CESNGELLPP PIVTPPAELD KGDTSAKLVF QSGFEPDCRI 60 ISAPNSDNDI IGIDHTLSEK NDFVKDLDEA LNGGKFQIQY TGGDESKRFA RIIPEPGNPS 120 NHVLHFWLGD SWLASENEVK ARIQANIYSI PKPYKEFYQR VRLFLHKDFK ALRQYPQPIN 180 WLTIAEFWNN EWWVESELYG FRITLGIGKP TAAESDLNFI LDAQDAGQIK VWEAKNTIVK 240 VPIDQWFTLE YYFREGNKDT GRFTVTITPD GGKKQTVFDV TNYTHNSHDL APNGLSGYNP 300 MKLYTSREVV GFMKNQGKAL QIYWDDFELW INKKME 336
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5A504-F1-model_v4 | 12 | 334 | 80 | 561 | 0.4391 |
0.5968 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0B6X837-F1-model_v4 | PL14_3 | 41 | 336 | 8 | 260 | 0.6518 |
0.7719 |
| AF-A0A518IDG5-F1-model_v4 | PL14 | 42 | 335 | 15 | 266 | 0.6485 |
0.7782 |
| AF-A0A068QQU0-F1-model_v4 | PL14 | 45 | 336 | 13 | 259 | 0.6478 |
0.7821 |
| AF-A0A517WTY2-F1-model_v4 | PL14_3 | 43 | 336 | 16 | 271 | 0.6469 |
0.7727 |
| AF-B1ZSX7-F1-model_v4 | PL14_3 | 47 | 335 | 20 | 271 | 0.6463 |
0.7839 |
| AF-A0A517W1Z6-F1-model_v4 | PL14_3 | 43 | 335 | 16 | 268 | 0.6462 |
0.78 |
| AF-A0A517RGL0-F1-model_v4 | PL14_3 | 41 | 336 | 14 | 268 | 0.6458 |
0.7725 |
| AF-A0A1B4XBI4-F1-model_v4 | PL20 | 41 | 336 | 15 | 253 | 0.6433 |
0.7955 |
| AF-A0A7D4XGN4-F1-model_v4 | PL20 | 41 | 336 | 18 | 251 | 0.6399 |
0.804 |
| AF-A0A1U8QK00-F1-model_v4 | PL20 | 42 | 336 | 16 | 248 | 0.6393 |
0.8014 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0B6X837 | PL14_3 | 41 | 336 | 8 | 260 | 0.6518 |
0.7719 |
| B1ZSX7 | PL14_3 | 47 | 335 | 20 | 271 | 0.6463 |
0.7839 |
| A0A1Y1QWD1 | PL14_3 | 41 | 336 | 17 | 266 | 0.6444 |
0.7795 |
| A0A517NY95 | PL14 | 41 | 332 | 24 | 294 | 0.6344 |
0.7477 |
| A0A517NTW7 | PL14 | 47 | 330 | 8 | 243 | 0.6319 |
0.7708 |
| A0A517WH01 | PL14_3 | 43 | 336 | 31 | 286 | 0.6295 |
0.7728 |
| UXX79901.1 | PL14_3 | 44 | 335 | 23 | 265 | 0.6286 |
0.7831 |
| A0A2H4SE99 | PL20 | 44 | 336 | 18 | 254 | 0.6284 |
0.7849 |
| A0A5B7TMX9 | PL14 | 43 | 334 | 26 | 268 | 0.6252 |
0.7788 |
| A0A7I8CY09 | PL14_3 | 44 | 336 | 14 | 274 | 0.6252 |
0.7459 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6kzk-assembly3.cif.gz_C | 47 | 333 | 3 | 241 | 0.6472 |
0.7759 |
| 6kcv-assembly3.cif.gz_C | 47 | 333 | 3 | 241 | 0.6442 |
0.7769 |
| 2zzj-assembly1.cif.gz_A | 47 | 336 | 1 | 234 | 0.6423 |
0.7805 |
| 6kcw-assembly1.cif.gz_A | 47 | 333 | 3 | 241 | 0.6421 |
0.774 |
| 5gmt-assembly2.cif.gz_B | 46 | 332 | 1 | 261 | 0.6391 |
0.7376 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q59639-F1-model_v4 | 44 | 333 | 29 | 233 | 0.6021 |
0.8147 |