Cluster: C54.bin_6_CGC97
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate:
- Genome ID: C54.bin_6
- CGC Family ID: CGCFAM_01877
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_1634 | 2331491 | 2332576 | - | GT4 |
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_1635 | 2332594 | 2333694 | - | GT4 |
| pfam | C54_scaffold_3399 | C54_scaffold_3399_1636 | 2333695 | 2334855 | - | Epimerase_2 |
| NULL(UNKNOWN) | C54_scaffold_3399 | C54_scaffold_3399_1637 | 2334877 | 2335998 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_1638 | 2336005 | 2337228 | - | GT4 |
| NULL(UNKNOWN) | C54_scaffold_3399 | C54_scaffold_3399_1639 | 2337354 | 2338754 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_1640 | 2338757 | 2339911 | - | GT4 |
| TC | C54_scaffold_3399 | C54_scaffold_3399_1641 | 2339883 | 2340944 | - | 9.B.97.6.1 |
| NULL(UNKNOWN) | C54_scaffold_3399 | C54_scaffold_3399_1642 | 2340925 | 2342127 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_1643 | 2342112 | 2342954 | - | GT2 |
Gene ID: C54_scaffold_3399_1634
Type: CAZyme
Location: 2331491 - 2332576 (-)
Type: CAZyme
Location: 2331491 - 2332576 (-)
Gene ID: C54_scaffold_3399_1635
Type: CAZyme
Location: 2332594 - 2333694 (-)
Type: CAZyme
Location: 2332594 - 2333694 (-)
Gene ID: C54_scaffold_3399_1636
Type: pfam
Location: 2333695 - 2334855 (-)
Type: pfam
Location: 2333695 - 2334855 (-)
Gene ID: C54_scaffold_3399_1637
Type:
Location: 2334877 - 2335998 (-)
Type:
Location: 2334877 - 2335998 (-)
Gene ID: C54_scaffold_3399_1638
Type: CAZyme
Location: 2336005 - 2337228 (-)
Type: CAZyme
Location: 2336005 - 2337228 (-)
Gene ID: C54_scaffold_3399_1639
Type:
Location: 2337354 - 2338754 (-)
Type:
Location: 2337354 - 2338754 (-)
Gene ID: C54_scaffold_3399_1640
Type: CAZyme
Location: 2338757 - 2339911 (-)
Type: CAZyme
Location: 2338757 - 2339911 (-)
Gene ID: C54_scaffold_3399_1641
Type: TC
Location: 2339883 - 2340944 (-)
Type: TC
Location: 2339883 - 2340944 (-)
Gene ID: C54_scaffold_3399_1642
Type:
Location: 2340925 - 2342127 (-)
Type:
Location: 2340925 - 2342127 (-)
Gene ID: C54_scaffold_3399_1643
Type: CAZyme
Location: 2342112 - 2342954 (-)
Type: CAZyme
Location: 2342112 - 2342954 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.