PROTEIN: C54_scaffold_3399_1637
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Protein File & Metadata
Source:
C54_scaffold_3399_1637.pdb
Genome ID:
Protein ID:
C54_scaffold_3399_1637
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Protein Sequence
MNIEYLLSSI LKQGGGNTFY TFSNTDGKRW MIPAKHMQTA MNLYQPSGIK GKGMKALFPY 60 LHWADIVYKT IGAERERYEL MPELNGLLCQ LFSSDNVEFS IFCGTPCVHQ KITMQISKGT 120 HILGYAKFCD NNEIKHIFQR EKETLDYLGQ KGVKSVPQCL YNGEWRNGIT IFVQTTTKTR 180 HSSTDHRWGA RETAFIKELH EKTKLHIPFE KTDYYRDLCL LCEEMNNLQG FDTKPIVNGV 240 SKVLNSYTNK EVNFSFYHAD FTPWNIYVEK GSLYAFDFEY AKRSYPPYLD YFHFFTQTAI 300 FERHLEADGI WKLFQQHKND IKEFFDGNQM DFAYLCYLLG IVAHYIKREN GVYSSSMIKY 360 FKLWINLIAQ LLP 373
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FV31-F1-model_v4 | 10 | 373 | 1 | 284 | 0.6455 |
0.7549 |
| AF-P77739-F1-model_v4 | 10 | 373 | 1 | 286 | 0.6335 |
0.7356 |
| AF-Q8ZQB9-F1-model_v4 | 7 | 373 | 1 | 294 | 0.6332 |
0.7311 |
| AF-P0AB03-F1-model_v4 | 7 | 373 | 1 | 297 | 0.6331 |
0.7248 |
| AF-Q32FH6-F1-model_v4 | 10 | 373 | 1 | 286 | 0.6326 |
0.7347 |
| AF-A0A0H3GV10-F1-model_v4 | 7 | 373 | 1 | 297 | 0.6326 |
0.7247 |
| AF-Q32E39-F1-model_v4 | 7 | 373 | 1 | 297 | 0.6318 |
0.7237 |
| AF-A0A0H3GPK7-F1-model_v4 | 10 | 373 | 1 | 287 | 0.6313 |
0.7354 |
| AF-Q9ER35-F1-model_v4 | 10 | 373 | 1 | 309 | 0.6268 |
0.7036 |
| AF-Q9HA64-F1-model_v4 | 10 | 373 | 1 | 309 | 0.62 |
0.6966 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QZY29804.1 | GT4 | 1 | 373 | 13 | 396 | 0.604 |
0.8312 |
| BDG09638.1 | GT4 | 1 | 373 | 1 | 715 | 0.5642 |
0.7475 |
| A0A1W1I9F4 | GT4 | 12 | 373 | 2 | 365 | 0.5188 |
0.8479 |
| QZT62303.1 | GT2 | 23 | 373 | 285 | 805 | 0.4132 |
0.7223 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QZY29804.1 | GT4 | 1 | 373 | 13 | 396 | 0.604 |
0.8312 |
| BDG09638.1 | GT4 | 1 | 373 | 1 | 715 | 0.5642 |
0.7475 |
| A0A1W1I9F4 | GT4 | 12 | 373 | 2 | 365 | 0.5188 |
0.8479 |
| QZT62303.1 | GT2 | 23 | 373 | 285 | 805 | 0.4132 |
0.7223 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3tyk-assembly1.cif.gz_A | 6 | 373 | 1 | 295 | 0.6638 |
0.7608 |
| 3w0q-assembly1.cif.gz_A | 7 | 373 | 1 | 294 | 0.6632 |
0.7621 |
| 3w0p-assembly1.cif.gz_A | 8 | 373 | 1 | 293 | 0.6607 |
0.7601 |
| 3w0r-assembly1.cif.gz_A | 8 | 373 | 1 | 293 | 0.6606 |
0.7603 |
| 3w0m-assembly1.cif.gz_A | 10 | 373 | 1 | 291 | 0.6543 |
0.7562 |
| 2ppq-assembly1.cif.gz_A-2 | 6 | 373 | 1 | 300 | 0.6322 |
0.7308 |
| 3jr1-assembly2.cif.gz_B | 5 | 373 | 1 | 295 | 0.6316 |
0.7269 |
| 6sun-assembly1.cif.gz_A | 1 | 373 | 3 | 329 | 0.6158 |
0.6851 |
| 4feu-assembly3.cif.gz_C | 24 | 344 | 1 | 262 | 0.6128 |
0.7368 |
| 6ch4-assembly3.cif.gz_C | 3 | 367 | 1 | 296 | 0.6114 |
0.7024 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A1VMB2-F1-model_v4 | 1 | 373 | 1 | 311 | 0.6572 |
0.7422 |
| AF-A6SUR4-F1-model_v4 | 1 | 373 | 1 | 311 | 0.6472 |
0.7376 |
| AF-A4G1V8-F1-model_v4 | 1 | 373 | 1 | 311 | 0.6471 |
0.7375 |
| AF-Q2YBJ8-F1-model_v4 | 1 | 373 | 1 | 306 | 0.6458 |
0.7405 |
| AF-Q2FV31-F1-model_v4 | 10 | 373 | 1 | 284 | 0.6455 |
0.7549 |
| AF-P74594-F1-model_v4 | 1 | 373 | 1 | 294 | 0.6435 |
0.7395 |
| AF-A5FZ25-F1-model_v4 | 1 | 373 | 1 | 310 | 0.6424 |
0.7312 |
| AF-B9JAQ3-F1-model_v4 | 1 | 373 | 1 | 310 | 0.6415 |
0.732 |
| AF-B5ZSW0-F1-model_v4 | 1 | 373 | 1 | 310 | 0.6408 |
0.7311 |
| AF-A4Z217-F1-model_v4 | 1 | 373 | 1 | 310 | 0.6403 |
0.7324 |