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Cluster: C171.bin_2_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C171_contig_233 C171_contig_233_78 95894 96547 - 1.B.44.2.1
NULL(UNKNOWN) C171_contig_233 C171_contig_233_79 96984 97367 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) C171_contig_233 C171_contig_233_80 97593 98594 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C171_contig_233 C171_contig_233_81 98623 100668 + CE20
TC C171_contig_233 C171_contig_233_82 100844 103516 + 2.A.21.9.2
pfam C171_contig_233 C171_contig_233_83 103667 103981 - RRM_1
TF C171_contig_233 C171_contig_233_84 104012 104452 - CSD
TC C171_contig_233 C171_contig_233_85 104480 105673 - 1.I.1.1.3
pfam C171_contig_233 C171_contig_233_86 105717 106787 - IMPDH | FMN_dh | DHO_dh | Glu_synthase | NMO
CAZyme C171_contig_233 C171_contig_233_87 107541 109499 + CBM62 | CBM62
Gene ID: C171_contig_233_78
Type: TC
Location: 95894 - 96547 (-)
Gene ID: C171_contig_233_79
Type:
Location: 96984 - 97367 (+)
Gene ID: C171_contig_233_80
Type:
Location: 97593 - 98594 (+)
Gene ID: C171_contig_233_81
Type: CAZyme
Location: 98623 - 100668 (+)
Gene ID: C171_contig_233_82
Type: TC
Location: 100844 - 103516 (+)
Gene ID: C171_contig_233_83
Type: pfam
Location: 103667 - 103981 (-)
Gene ID: C171_contig_233_84
Type: TF
Location: 104012 - 104452 (-)
Gene ID: C171_contig_233_85
Type: TC
Location: 104480 - 105673 (-)
Gene ID: C171_contig_233_86
Type: pfam
Location: 105717 - 106787 (-)
Gene ID: C171_contig_233_87
Type: CAZyme
Location: 107541 - 109499 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C171_contig_233_80 vegetarian > omnivore 1.28721 0.00566
C171_contig_233_84 vegan > omnivore 1.08917 0.02089
C171_contig_233_85 vegetarian > omnivore 1.21089 0.01458
C171_contig_233_86 vegetarian > omnivore 1.27362 0.01458

🧭 Explore Read Mapping of CGC

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