PROTEIN: C171_contig_233_80
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Protein File & Metadata
Source:
C171_contig_233_80.pdb
Genome ID:
Protein ID:
C171_contig_233_80
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Protein Sequence
MRIRKGAVAV GILTLAGITL CFGGSPKCDA AGRESRSGKK QPAGVEVLGD PKFEKGLAVS 60 PLWPEIVQQN GGFEKTNTDT IRFGRGDADP VWQMAQWASK YDLGGTVPVE GRDGVTYANP 120 GKKVTRFADG TLLLDITTST EYEAPRTGSD AWPHLLIQQD FENRPNVGRI SRLDFTMELR 180 IVHCDKKMTD AEFNESLHTA QSPFYFFMRN VNPDSPDYQL SLWVGVPSFD YRYPRLDSTE 240 YVQWDIGTAT YIYAIPPRTI WGDVSFHDLK WHRARLDLLP LIRQGVAAMK DKGQFLHTDL 300 DDLELMGMNF GWEVPGTFDA GLMVRNLSVR AVE 333
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q9S5X8-F1-model_v4 | GH12 | 54 | 333 | 1 | 256 | 0.575 |
0.6689 |
| AF-A0A0F6ALT7-F1-model_v4 | GH12 | 54 | 333 | 1 | 256 | 0.5745 |
0.668 |
| AF-O08428-F1-model_v4 | GH12 | 54 | 333 | 1 | 255 | 0.5741 |
0.6688 |
| AF-P96491-F1-model_v4 | GH12 | 54 | 333 | 1 | 255 | 0.5741 |
0.6689 |
| AF-Q60032-F1-model_v4 | GH12 | 54 | 333 | 1 | 255 | 0.5734 |
0.6683 |
| AF-A1S0U6-F1-model_v4 | GH12 | 37 | 333 | 26 | 310 | 0.5706 |
0.6719 |
| AF-A0A0B5KLE4-F1-model_v4 | GH12 | 53 | 333 | 15 | 271 | 0.5614 |
0.6679 |
| AF-A0A2H4R494-F1-model_v4 | GH12 | 54 | 332 | 14 | 235 | 0.5594 |
0.7067 |
| AF-B9K8J9-F1-model_v4 | GH12 | 54 | 333 | 34 | 291 | 0.5434 |
0.6642 |
| AF-G0CFQ6-F1-model_v4 | GH12 | 65 | 331 | 25 | 262 | 0.5402 |
0.6767 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AHC52035.1 | GH12 | 35 | 333 | 25 | 318 | 0.5725 |
0.6494 |
| E0SSM3 | GH12 | 39 | 333 | 1 | 297 | 0.5722 |
0.6475 |
| A1S0U6 | GH12 | 37 | 333 | 26 | 310 | 0.5706 |
0.6719 |
| A0A1X7S495 | GH12 | 61 | 332 | 1 | 231 | 0.5614 |
0.6788 |
| BDB99994.1 | GH12 | 38 | 333 | 36 | 314 | 0.5433 |
0.6697 |
| A0A066XLD5 | GH12 | 53 | 333 | 26 | 275 | 0.5203 |
0.6485 |
| G4FFR2 | GH12 | 6 | 333 | 17 | 326 | 0.5186 |
0.5674 |
| A0A510DG84 | CBM13 | 41 | 333 | 37 | 316 | 0.5071 |
0.6961 |
| Q2U939 | GH12 | 54 | 333 | 54 | 318 | 0.5031 |
0.6309 |
| A0A7D5PAM7 | GH12 | 9 | 333 | 7 | 303 | 0.424 |
0.5742 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7w3v-assembly1.cif.gz_A | 56 | 332 | 1 | 222 | 0.5877 |
0.7217 |
| 3vlb-assembly2.cif.gz_D | 54 | 332 | 1 | 218 | 0.5864 |
0.725 |
| 3b7m-assembly1.cif.gz_A | 54 | 331 | 1 | 216 | 0.5838 |
0.7254 |
| 2c1f-assembly1.cif.gz_A | 54 | 332 | 1 | 219 | 0.5809 |
0.7184 |
| 5m2d-assembly2.cif.gz_B | 56 | 332 | 1 | 220 | 0.5806 |
0.7158 |
| 1oa3-assembly4.cif.gz_D | 54 | 332 | 1 | 218 | 0.579 |
0.7157 |
| 1h8v-assembly6.cif.gz_F | 54 | 332 | 1 | 218 | 0.5786 |
0.7152 |
| 1olq-assembly2.cif.gz_B | 54 | 332 | 1 | 218 | 0.578 |
0.7143 |
| 2jem-assembly2.cif.gz_B | 54 | 332 | 1 | 232 | 0.5775 |
0.6961 |
| 6sdu-assembly2.cif.gz_B | 56 | 332 | 1 | 213 | 0.5755 |
0.7178 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.