Cluster: BrooksB_2017_SRR5405854_bin.5_CGC16
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 9
- Substrate:
- Genome ID: BrooksB_2017_SRR5405854_bin.5
- CGC Family ID: CGCFAM_02339
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BrooksB_2017_SRR5405854_bin.5_k141_3881 | BrooksB_2017_SRR5405854_bin.5_k141_3881_12 | 7035 | 8144 | - | GT4 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405854_bin.5_k141_3881 | BrooksB_2017_SRR5405854_bin.5_k141_3881_13 | 8155 | 9705 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | BrooksB_2017_SRR5405854_bin.5_k141_3881 | BrooksB_2017_SRR5405854_bin.5_k141_3881_14 | 9706 | 10665 | - | GT32 |
| CAZyme | BrooksB_2017_SRR5405854_bin.5_k141_3881 | BrooksB_2017_SRR5405854_bin.5_k141_3881_15 | 10671 | 11666 | - | GT113 |
| CAZyme | BrooksB_2017_SRR5405854_bin.5_k141_3881 | BrooksB_2017_SRR5405854_bin.5_k141_3881_16 | 11668 | 12642 | - | GT2 |
| CAZyme | BrooksB_2017_SRR5405854_bin.5_k141_3881 | BrooksB_2017_SRR5405854_bin.5_k141_3881_17 | 12656 | 13615 | - | GT2 |
| CAZyme | BrooksB_2017_SRR5405854_bin.5_k141_3881 | BrooksB_2017_SRR5405854_bin.5_k141_3881_18 | 13608 | 14618 | - | GT2 |
| CAZyme | BrooksB_2017_SRR5405854_bin.5_k141_3881 | BrooksB_2017_SRR5405854_bin.5_k141_3881_19 | 14658 | 15623 | - | GT2 |
| pfam | BrooksB_2017_SRR5405854_bin.5_k141_3881 | BrooksB_2017_SRR5405854_bin.5_k141_3881_20 | 15638 | 16747 | - | Glyphos_transf |
| CAZyme | BrooksB_2017_SRR5405854_bin.5_k141_3881 | BrooksB_2017_SRR5405854_bin.5_k141_3881_21 | 16744 | 17823 | - | GT4 |
| pfam | BrooksB_2017_SRR5405854_bin.5_k141_3881 | BrooksB_2017_SRR5405854_bin.5_k141_3881_22 | 17825 | 18223 | - | CTP_transf_like |
| CAZyme | BrooksB_2017_SRR5405854_bin.5_k141_3881 | BrooksB_2017_SRR5405854_bin.5_k141_3881_23 | 18220 | 19053 | - | GT2 |
| pfam | BrooksB_2017_SRR5405854_bin.5_k141_3881 | BrooksB_2017_SRR5405854_bin.5_k141_3881_24 | 19070 | 20170 | - | EpsG |
| TC | BrooksB_2017_SRR5405854_bin.5_k141_3881 | BrooksB_2017_SRR5405854_bin.5_k141_3881_25 | 20201 | 20854 | - | 8.A.3.2.1 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405854_bin.5_k141_3881 | BrooksB_2017_SRR5405854_bin.5_k141_3881_26 | 20856 | 21560 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BrooksB_2017_SRR5405854_bin.5_k141_3881 | BrooksB_2017_SRR5405854_bin.5_k141_3881_27 | 21603 | 22178 | - | 9.B.18.1.3 |
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_3881_12
Type: CAZyme
Location: 7035 - 8144 (-)
Type: CAZyme
Location: 7035 - 8144 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_3881_13
Type:
Location: 8155 - 9705 (-)
Type:
Location: 8155 - 9705 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_3881_14
Type: CAZyme
Location: 9706 - 10665 (-)
Type: CAZyme
Location: 9706 - 10665 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_3881_15
Type: CAZyme
Location: 10671 - 11666 (-)
Type: CAZyme
Location: 10671 - 11666 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_3881_16
Type: CAZyme
Location: 11668 - 12642 (-)
Type: CAZyme
Location: 11668 - 12642 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_3881_17
Type: CAZyme
Location: 12656 - 13615 (-)
Type: CAZyme
Location: 12656 - 13615 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_3881_18
Type: CAZyme
Location: 13608 - 14618 (-)
Type: CAZyme
Location: 13608 - 14618 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_3881_19
Type: CAZyme
Location: 14658 - 15623 (-)
Type: CAZyme
Location: 14658 - 15623 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_3881_20
Type: pfam
Location: 15638 - 16747 (-)
Type: pfam
Location: 15638 - 16747 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_3881_21
Type: CAZyme
Location: 16744 - 17823 (-)
Type: CAZyme
Location: 16744 - 17823 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_3881_22
Type: pfam
Location: 17825 - 18223 (-)
Type: pfam
Location: 17825 - 18223 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_3881_23
Type: CAZyme
Location: 18220 - 19053 (-)
Type: CAZyme
Location: 18220 - 19053 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_3881_24
Type: pfam
Location: 19070 - 20170 (-)
Type: pfam
Location: 19070 - 20170 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_3881_25
Type: TC
Location: 20201 - 20854 (-)
Type: TC
Location: 20201 - 20854 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_3881_26
Type:
Location: 20856 - 21560 (-)
Type:
Location: 20856 - 21560 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_3881_27
Type: TC
Location: 21603 - 22178 (-)
Type: TC
Location: 21603 - 22178 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.