PROTEIN: BrooksB_2017_SRR5405854_bin.5_k141_3881_26
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Protein File & Metadata
Source:
BrooksB_2017_SRR5405854_bin.5_k141_3881_26.pdb
Genome ID:
Protein ID:
BrooksB_2017_SRR5405854_bin.5_k141_3881_26
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Protein Sequence
MTIFNKNINR VFSLIKSKLL FLLLFTIVGT TAVGLYTVFI ISPIYSVSSK LIMKNTSSQT 60 NGQNNDAQTI EAINLFQRQA KTYLEIADLP PVKDETNKAL SLSPDEISKI KSVKLTNDSG 120 SQLVTITVRG LDRNLAERYI KEYVSQYKKF TADRLGRDNL SVVTEALGSD SPVYPVLWKN 180 LLVSILVFSF VGFNVIFIKY VLSDSIDSYE DLEELVGTPV LGMIPTIERK RRGE 234
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FUV1-F1-model_v4 | 1 | 227 | 1 | 220 | 0.8316 |
0.8812 |
| AF-Q2G1K8-F1-model_v4 | 1 | 228 | 1 | 222 | 0.8071 |
0.8567 |
| AF-A0A133CF17-F1-model_v4 | 1 | 229 | 1 | 225 | 0.7574 |
0.8474 |
| AF-K0EV96-F1-model_v4 | 4 | 234 | 1 | 292 | 0.5977 |
0.7912 |
| AF-K0EZX4-F1-model_v4 | 4 | 234 | 1 | 311 | 0.5236 |
0.7065 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| URM97002.1 | GT4 | 1 | 216 | 372 | 588 | 0.4559 |
0.7138 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| URM97002.1 | GT4 | 1 | 216 | 372 | 588 | 0.4559 |
0.7138 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7nhr-assembly1.cif.gz_G | 6 | 234 | 1 | 344 | 0.502 |
0.7319 |
| 7nhs-assembly1.cif.gz_A | 6 | 234 | 1 | 302 | 0.4987 |
0.7109 |
| 7nii-assembly1.cif.gz_H | 6 | 234 | 1 | 345 | 0.4963 |
0.7242 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39850-F1-model_v4 | 1 | 227 | 1 | 221 | 0.8417 |
0.8895 |
| AF-Q5HCN3-F1-model_v4 | 1 | 227 | 1 | 220 | 0.8406 |
0.8893 |
| AF-Q04662-F1-model_v4 | 3 | 228 | 8 | 228 | 0.8373 |
0.8968 |
| AF-Q3K0S9-F1-model_v4 | 3 | 227 | 8 | 228 | 0.8362 |
0.8955 |
| AF-Q9RQQ1-F1-model_v4 | 1 | 227 | 1 | 220 | 0.8356 |
0.8854 |
| AF-P0C0T8-F1-model_v4 | 3 | 228 | 8 | 228 | 0.835 |
0.8945 |
| AF-P59221-F1-model_v4 | 3 | 228 | 8 | 228 | 0.8319 |
0.8912 |
| AF-P63859-F1-model_v4 | 2 | 227 | 1 | 220 | 0.8305 |
0.8802 |
| AF-P63858-F1-model_v4 | 2 | 227 | 1 | 220 | 0.83 |
0.8797 |
| AF-Q54519-F1-model_v4 | 2 | 227 | 6 | 228 | 0.8275 |
0.882 |