PROTEIN: BrooksB_2017_SRR5405854_bin.5_k141_3881_13
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Protein File & Metadata
Source:
BrooksB_2017_SRR5405854_bin.5_k141_3881_13.pdb
Genome ID:
Protein ID:
BrooksB_2017_SRR5405854_bin.5_k141_3881_13
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Protein Sequence
MKYTKKSRTE FATLNTSIAL ALQPFQVLLG FINRTIFIHL LGVTYLGLNN YLSSLVSILS 60 LAELGVAGAM SYALYGPLDR EEHGKINAFM ILFKKLYRII GFSIFILGAI LSLFLPYMIK 120 DYTVNSEVYL IFFLFVFNSA SSYFFSYKRT LLYVDQRNYM MTLIDFGLNT LRVCLQIGIL 180 FFTKNYIFYL LISIMMNFIG NIIMSGIVDR LYGYLFKNEI TPINQEEKGK FIRNIKGNIV 240 GSIGETIVFQ TDSILMASFV SLAAIGIYGN YTYVLGFISL ILNTMINSVV SSVGNLVHSE 300 STTVADMVKF LKKFQFIAFS LIYFASLGYL MFIHPFMTIW LGESFSFNRT VEILIVLHFF 360 LTFYRRPILT LISVYGLSYE QNKKVIVEIL LNISLSLYFL AILDLGVAGI LLGTIGSTIL 420 TCSWYEPYSA FKYGLKASSK DFFKTLLQDF TVAGISFLLL SLLDNFLLTQ LDIILSLAIK 480 IVLYLIVLGV YVFLFRNHEG GRQIILMIQK VLKLKK 516
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58467-F1-model_v4 | 6 | 516 | 1 | 507 | 0.8362 |
0.8625 |
| AF-Q2G262-F1-model_v4 | 5 | 516 | 1 | 476 | 0.8312 |
0.8801 |
| AF-H9L497-F1-model_v4 | 6 | 515 | 1 | 486 | 0.8215 |
0.869 |
| AF-A0A0H3GSJ3-F1-model_v4 | 6 | 516 | 1 | 478 | 0.8118 |
0.8613 |
| AF-P77377-F1-model_v4 | 6 | 515 | 1 | 486 | 0.8115 |
0.8587 |
| AF-Q5FAD8-F1-model_v4 | 8 | 515 | 1 | 473 | 0.7917 |
0.8452 |
| AF-Q2G0R7-F1-model_v4 | 6 | 512 | 4 | 502 | 0.7863 |
0.8245 |
| AF-Q9I1M8-F1-model_v4 | 10 | 503 | 1 | 469 | 0.784 |
0.8412 |
| AF-Q2FXH6-F1-model_v4 | 6 | 515 | 1 | 549 | 0.7833 |
0.8379 |
| AF-P26400-F1-model_v4 | 6 | 438 | 6 | 430 | 0.7814 |
0.8752 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 4 | 516 | 1 | 512 | 0.8091 |
0.8348 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 4 | 511 | 35 | 545 | 0.7635 |
0.8152 |
| QNU38870.1 | GT4 | 9 | 516 | 1 | 478 | 0.7103 |
0.8363 |
| QJC17489.1 | GT2 | 1 | 516 | 307 | 845 | 0.6895 |
0.8633 |
| AF-D1BIF1-F1-model_v4 | GT4 | 6 | 516 | 6 | 657 | 0.6492 |
0.8575 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 7 | 516 | 1 | 589 | 0.6489 |
0.8403 |
| AF-F9ZKY1-F1-model_v4 | GT2 | 4 | 506 | 17 | 513 | 0.6487 |
0.8423 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 5 | 516 | 2 | 559 | 0.6435 |
0.8127 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 9 | 516 | 1 | 580 | 0.6387 |
0.8078 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 4 | 516 | 4 | 496 | 0.6383 |
0.8433 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 4 | 516 | 1 | 512 | 0.8091 |
0.8348 |
| A0A160T2N7 | GT28 | 4 | 511 | 35 | 545 | 0.7635 |
0.8152 |
| QNU38870.1 | GT4 | 9 | 516 | 1 | 478 | 0.7103 |
0.8363 |
| QJC17489.1 | GT2 | 1 | 516 | 307 | 845 | 0.6895 |
0.8633 |
| D1BIF1 | GT4 | 6 | 516 | 6 | 657 | 0.6492 |
0.8575 |
| A0A3Q9G719 | GT4 | 7 | 516 | 1 | 589 | 0.6489 |
0.8403 |
| F9ZKY1 | GT2 | 4 | 506 | 17 | 513 | 0.6487 |
0.8423 |
| A0A3T0RPT8 | GT4 | 5 | 516 | 2 | 559 | 0.6435 |
0.8127 |
| A0A2U8PPB3 | GT4 | 9 | 516 | 1 | 580 | 0.6387 |
0.8078 |
| A0A517Z2I8 | GT2 | 4 | 516 | 4 | 496 | 0.6383 |
0.8433 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 17 | 504 | 1 | 496 | 0.7771 |
0.8238 |
| 6nc6-assembly2.cif.gz_B | 16 | 502 | 1 | 461 | 0.7671 |
0.8284 |
| 7wag-assembly1.cif.gz_A | 9 | 507 | 1 | 510 | 0.7493 |
0.7991 |
| 6fhz-assembly1.cif.gz_A | 13 | 438 | 9 | 437 | 0.7313 |
0.8303 |
| 6hfb-assembly3.cif.gz_C | 3 | 437 | 2 | 448 | 0.6719 |
0.7617 |
| 4mlb-assembly1.cif.gz_C | 3 | 437 | 2 | 449 | 0.6712 |
0.7617 |
| 5y50-assembly1.cif.gz_A | 9 | 436 | 7 | 437 | 0.6703 |
0.7686 |
| 5xjj-assembly1.cif.gz_A | 10 | 437 | 10 | 439 | 0.6662 |
0.7615 |
| 6gwh-assembly1.cif.gz_A | 3 | 437 | 1 | 436 | 0.6621 |
0.7438 |
| 6z70-assembly1.cif.gz_A | 6 | 438 | 1 | 444 | 0.6613 |
0.7471 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 9 | 516 | 1 | 502 | 0.8544 |
0.8856 |
| AF-Q58467-F1-model_v4 | 6 | 516 | 1 | 507 | 0.8362 |
0.8625 |
| AF-Q48457-F1-model_v4 | 4 | 516 | 1 | 485 | 0.8316 |
0.8755 |
| AF-P77377-F1-model_v4 | 6 | 515 | 1 | 486 | 0.8115 |
0.8587 |
| AF-P33699-F1-model_v4 | 5 | 516 | 3 | 487 | 0.8108 |
0.8623 |
| AF-D4GU68-F1-model_v4 | 7 | 516 | 1 | 472 | 0.799 |
0.854 |
| AF-O32273-F1-model_v4 | 5 | 516 | 1 | 483 | 0.7981 |
0.8447 |
| AF-O34674-F1-model_v4 | 8 | 515 | 1 | 540 | 0.7977 |
0.8483 |
| AF-Q99191-F1-model_v4 | 6 | 438 | 7 | 432 | 0.7875 |
0.8814 |
| AF-D4GYG8-F1-model_v4 | 9 | 515 | 1 | 476 | 0.7875 |
0.8383 |