y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_002937m |
Family | GT31 |
Protein Properties | Length: 683 Molecular Weight: 77556.4 Isoelectric Point: 8.549 |
Chromosome | Chromosome/Scaffold: 04251 Start: 253109 End: 259144 |
Description | Galactosyltransferase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 450 | 632 | 0 |
ERMAVRKTWMQSTPIKSSDVVVRFFVALSPRKEANAILKKEASYFGDIVILPFMDRYELVVLKTVAICEFGVQNVSAAHIMKCDDDTFVRVDAVLKEINN ISPEKSLYMGNLNLLHRPLRTGKWAVTFEEWPEAVYPPYANGPGYVISSDIAKFVVSQHDSRSLRLFKMEDVSMGMWVEQFNS |
Full Sequence |
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Protein Sequence Length: 683 Download |
MKRLKSEPPS GRRCKLSHFL LGIGALYLVF LAFKFPHFLE IAATLSGDDS YVGLDVAAAG 60 DMEDSDLSKP IFSSVYKDTF HRKLEDNQNQ NAPRMPSKEP LQEVKEVSKP IKPLQHRYGR 120 ITGEIMRRKN RTSDLSVLER LADEAWILGL KAWGEMEKYD EKEIAQSSVF EGKPESCPSW 180 VSMSGTELAG GEKMMFLPCG LAAGSSITVV GTPHFAHEEY VPQLARLRIR DGIVKVSQFM 240 VELQGLKAVD GEDPPKILHL NPRLRGDWSK RPVIEHNTCY RMQWGTAQRC DGLPSKKDED 300 MLVDGFLRCE KWMRHDIVDP KESKTTSWFK RFIGREQKPK VTWPFPFVEG RLFILTLRAG 360 VDGYHINVGG RHVTSFPYRP GFTLQDATGL AIKGDIDVHS VYATSLPSSH PSFSPQRVLE 420 MSEKWKALPL PKTPIQLFVG ILSATNHFAE RMAVRKTWMQ STPIKSSDVV VRFFVALSPR 480 KEANAILKKE ASYFGDIVIL PFMDRYELVV LKTVAICEFG VQNVSAAHIM KCDDDTFVRV 540 DAVLKEINNI SPEKSLYMGN LNLLHRPLRT GKWAVTFEEW PEAVYPPYAN GPGYVISSDI 600 AKFVVSQHDS RSLRLFKMED VSMGMWVEQF NSSTPVQYSH NWKFCQYGCM EEYYTAHYQS 660 PRQMICLWDK LVRGGAHCCN FR* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00908 | Gal-bind_lectin | 2.0e-18 | 198 | 401 | 204 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
cd00070 | GLECT | 3.0e-20 | 196 | 401 | 206 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
pfam00337 | Gal-bind_lectin | 9.0e-24 | 197 | 401 | 205 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
pfam01762 | Galactosyl_T | 3.0e-25 | 449 | 628 | 190 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03133 | PLN03133 | 4.0e-127 | 152 | 679 | 547 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001154260.1 | 0 | 1 | 682 | 1 | 684 | galactosyltransferase family protein [Arabidopsis thaliana] |
RefSeq | XP_002272405.1 | 0 | 12 | 682 | 3 | 669 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308783.1 | 0 | 138 | 682 | 1 | 545 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322528.1 | 0 | 141 | 682 | 1 | 542 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531052.1 | 0 | 1 | 682 | 1 | 683 | transferase, transferring glycosyl groups, putative [Ricinus communis] |