y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb08g021480.1 |
Family | GT31 |
Protein Properties | Length: 604 Molecular Weight: 66408.2 Isoelectric Point: 8.5552 |
Chromosome | Chromosome/Scaffold: 8 Start: 53144833 End: 53148157 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 371 | 553 | 0 |
ERMAIRKTWMQFPAIQSGNAVARFFVALSHRKEINAALKKEAEYFGDIVILPFMDRYELVVLKTVALCQYGVQNVTADYIMKCDDDTFVRLDVVLQQIAA YNRTLPLYLGNLNLYHSPQRSGKWAVTFEEWPEAAYPPYANGPGYVISADIARDIASRHTNHSLRLFKMEDVSMGMWVEDFNA |
Full Sequence |
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Protein Sequence Length: 604 Download |
MKRARSSEGF LGVCRLRSRR GLAPLLAAAA FAYLLFVSVK LAGLSGAVGT APAVGRRLAT 60 AGAGKLPPLR RRVDKPPARA MGGTSGGGVS GYGRIINEML RRQEAVWERR KRWGRLGNFT 120 ELERLAAKAW ALGAVAWEEA SAFAGDVDDI AGDGEGAAAK CPGSLTLNAG ETEAFLPCGL 180 AAGSAVTVVG MAREARPEYV EALERSGAGN GTVLVAQFAV ELRGLRAVDG EEPPRILHLN 240 PRLRGDWSGR SVLEMNTCFR MQWGRAQRCD GTPWPSSDLH LGNFTCSCAS IIVCGSWLKY 300 KGFTLEDATG LAVTGGIDVH SVYATALPTA HPSFSLQQVL EMSERWKAHP LPKEPIHLFI 360 GILSATNHFA ERMAIRKTWM QFPAIQSGNA VARFFVALSH RKEINAALKK EAEYFGDIVI 420 LPFMDRYELV VLKTVALCQY GVQNVTADYI MKCDDDTFVR LDVVLQQIAA YNRTLPLYLG 480 NLNLYHSPQR SGKWAVTFEE WPEAAYPPYA NGPGYVISAD IARDIASRHT NHSLRLFKME 540 DVSMGMWVED FNASAPVQYV HSWRFCQFGC VDYYLTAHYQ SPWHMLCLWE KLSAGRRDCC 600 NYI* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03133 | PLN03133 | 3.0e-7 | 160 | 278 | 128 | + beta-1,3-galactosyltransferase; Provisional | ||
smart00908 | Gal-bind_lectin | 4.0e-8 | 177 | 322 | 155 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
pfam00337 | Gal-bind_lectin | 1.0e-8 | 176 | 322 | 158 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
pfam01762 | Galactosyl_T | 7.0e-27 | 370 | 550 | 202 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03133 | PLN03133 | 9.0e-87 | 313 | 600 | 293 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABA99401.2 | 0 | 1 | 602 | 1 | 657 | Galactosyltransferase family, putative, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EEC69670.1 | 0 | 1 | 602 | 1 | 657 | hypothetical protein OsI_39103 [Oryza sativa Indica Group] |
RefSeq | NP_001130382.1 | 0 | 1 | 602 | 1 | 647 | hypothetical protein LOC100191478 [Zea mays] |
RefSeq | XP_002442535.1 | 0 | 1 | 602 | 1 | 617 | hypothetical protein SORBIDRAFT_08g021470 [Sorghum bicolor] |
RefSeq | XP_002442536.1 | 0 | 1 | 603 | 1 | 603 | hypothetical protein SORBIDRAFT_08g021480 [Sorghum bicolor] |