y
Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10004256 |
Family | GT31 |
Protein Properties | Length: 675 Molecular Weight: 77182.3 Isoelectric Point: 8.5494 |
Chromosome | Chromosome/Scaffold: 122 Start: 127058 End: 130045 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT31 | 441 | 624 | 0 |
ERMAVRKSWMRHRLIRTSDVVARFFVSLHARMDVNLELKKEAEFFGDIVIVPYMDNYDLVVLKTVAICEYGVHIVGAKYIMKGDDDTFIRVETVLNEAKK VPESRSLYIGNINYFHKPLRHGKWAVTYQEWPEEDYPPYANGPGYILSADIANFIASEFEKHKLRLFKMEDVSMGMWVQKFNRT |
Full Sequence |
---|
Protein Sequence Length: 675 Download |
MKRGKSDTRL DKFGAVTRQR SLHILIALGL LYFLFITVEI PLLFNSATPT SSSSSSSSVS 60 SDYITYPSKL QSEQDFQEQD APSRPASWVS ESSPTQTTPP KRIVSGLKFD PETFDPTKKD 120 RSVELHKSAK TAWEVGRKMW DEIERDEFKF LDLDKKKQSE KNRSSESSCP NSVSLTGSEF 180 LKRGRLVELP CGLTLGSHIT VVGKPRAAHA EDVPYISLIK KGKPRVMVSQ FMMELQGLKI 240 VDGEDPPRVL HFNPRLKGDW SSRPVIEQNT CYRMQWGTGV RCEGWKSKAD EETVDGQVKC 300 EKWIRDDDNR SEESKANWWL SRLIGRTKKV TFDWPFPFVE EKMFVLTLTA GLEGYHVNVD 360 GRHVTSFPYR TGFTLEDATG LTVYGDVDVH SVFAASLPAT HPSFAPQRHL EKSIVWRAPA 420 LPEGPVELFI GILSAGNHFA ERMAVRKSWM RHRLIRTSDV VARFFVSLHA RMDVNLELKK 480 EAEFFGDIVI VPYMDNYDLV VLKTVAICEY GVHIVGAKYI MKGDDDTFIR VETVLNEAKK 540 VPESRSLYIG NINYFHKPLR HGKWAVTYQE WPEEDYPPYA NGPGYILSAD IANFIASEFE 600 KHKLRLFKME DVSMGMWVQK FNRTKTVQYV HSLKFCQFGC FEGYYTSHYQ SPRQMICLWE 660 KLQKFGLPQC CNMR* 720 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00908 | Gal-bind_lectin | 4.0e-17 | 190 | 392 | 203 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
cd00070 | GLECT | 4.0e-20 | 187 | 393 | 207 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
pfam00337 | Gal-bind_lectin | 3.0e-24 | 185 | 392 | 208 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
pfam01762 | Galactosyl_T | 5.0e-28 | 440 | 620 | 192 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03133 | PLN03133 | 3.0e-126 | 123 | 674 | 561 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95149.1 | 0 | 33 | 674 | 1 | 642 | unknown [Populus trichocarpa] |
RefSeq | NP_201068.1 | 0 | 57 | 674 | 54 | 681 | galactosyltransferase family protein [Arabidopsis thaliana] |
RefSeq | XP_002318619.1 | 0 | 1 | 672 | 1 | 664 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322135.1 | 0 | 1 | 674 | 1 | 674 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511491.1 | 0 | 1 | 674 | 1 | 670 | galactosyltransferase, putative [Ricinus communis] |