y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10042164 |
Family | GT31 |
Protein Properties | Length: 673 Molecular Weight: 76935.1 Isoelectric Point: 8.9802 |
Chromosome | Chromosome/Scaffold: 123 Start: 990904 End: 993880 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 439 | 622 | 0 |
ERMAVRKSWLRHRLIRTSHVVARFFVSLHARMDVNLELKKEAEFFRDIVIVPYMDNYDLVVLKTVAICEFGVHSVGAKYIMKGDDDTFIRVETVLNEAKK VPEGKSLYIGNINYFHKPLRHGKWAVTYQEWPEEDYPPYANGPGYILSADIANFIASEFEKHKLRLFKMEDVSMGMWVQKFNRT |
Full Sequence |
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Protein Sequence Length: 673 Download |
MKRGKSDTRL DRFGAVTRQR SLHILIALGL LYFLFITVEI PLLFNSATPT SSSSSSVSSD 60 SITYPSKLQS EQDFQEQDAP SRPASWVSES SPSQTIPPKR IVSGLKFDPE TFDPTKKDRS 120 VELHKSAKTA WEVGRKMWDE IERDEFKFLH LDKKKPSEKN RSSESSCPNS VSLTGSEFLK 180 RGRLVELPCG LTLGSHITVV GKPRAAHAEA EPKISMIKKG RPRVMVSQFM MELQGLKIVD 240 GEDPPRVLHF NPRLKGDWSS RPVIEQNTCY RMQWGTGVRC EGWKSKADEE TVDGQVKCEK 300 WIRDDDNRSE ESKANWWLSR LIGRTKKVTF DWPFPFVEEK MFVLTLTAGL EGYHVNVDGR 360 HVTSFPYRTG FTLEDATGLT VYGDVDVHSV FAASLPASHP SFAPQRHLEK SIVWRAPALP 420 EGPVELFIGI LSAGNHFAER MAVRKSWLRH RLIRTSHVVA RFFVSLHARM DVNLELKKEA 480 EFFRDIVIVP YMDNYDLVVL KTVAICEFGV HSVGAKYIMK GDDDTFIRVE TVLNEAKKVP 540 EGKSLYIGNI NYFHKPLRHG KWAVTYQEWP EEDYPPYANG PGYILSADIA NFIASEFEKH 600 KLRLFKMEDV SMGMWVQKFN RTKTVQYVHS LKFCQFGCFE GYYTSHYQSP RQMICLWEKL 660 QKFGLPQCCN MR* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00908 | Gal-bind_lectin | 7.0e-17 | 188 | 390 | 203 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
cd00070 | GLECT | 4.0e-20 | 185 | 391 | 207 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
pfam00337 | Gal-bind_lectin | 4.0e-24 | 183 | 390 | 208 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
pfam01762 | Galactosyl_T | 2.0e-27 | 438 | 618 | 192 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03133 | PLN03133 | 8.0e-123 | 81 | 672 | 631 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95149.1 | 0 | 33 | 672 | 1 | 642 | unknown [Populus trichocarpa] |
RefSeq | NP_201068.1 | 0 | 55 | 672 | 54 | 681 | galactosyltransferase family protein [Arabidopsis thaliana] |
RefSeq | XP_002318619.1 | 0 | 1 | 670 | 1 | 664 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322135.1 | 0 | 1 | 672 | 1 | 674 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511491.1 | 0 | 1 | 672 | 1 | 670 | galactosyltransferase, putative [Ricinus communis] |