y
Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00022644m |
Family | GT31 |
Protein Properties | Length: 155 Molecular Weight: 18093.7 Isoelectric Point: 6.6659 |
Chromosome | Chromosome/Scaffold: 002549 Start: 634 End: 1661 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT31 | 1 | 103 | 7.5e-35 |
MKTDDDAFVRIDEVISSLKKSNSHGLLYGLISFQSSPHRDKDSKWFISRKEWPFDMYPPWAHGPGYIISRDIAKFVVRGHQELTLQLFKLEDVAMGIWIQ QYK |
Full Sequence |
---|
Protein Sequence Length: 155 Download |
MKTDDDAFVR IDEVISSLKK SNSHGLLYGL ISFQSSPHRD KDSKWFISRK EWPFDMYPPW 60 AHGPGYIISR DIAKFVVRGH QELTLQLFKL EDVAMGIWIQ QYKRSGQQVN IVTDDRFYSE 120 GCESDYVLAH YQTPRLMMCL WEKLKTDYQA VCCE* 180 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01762 | Galactosyl_T | 2.0e-19 | 1 | 103 | 109 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03133 | PLN03133 | 5.0e-77 | 1 | 153 | 154 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE54467.1 | 0 | 1 | 154 | 55 | 208 | hypothetical protein OsJ_01565 [Oryza sativa Japonica Group] |
RefSeq | NP_001042919.1 | 0 | 1 | 154 | 446 | 599 | Os01g0328900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001150985.1 | 0 | 1 | 154 | 439 | 592 | beta 1, 3 galactosyltransferase [Zea mays] |
RefSeq | XP_002316064.1 | 0 | 1 | 154 | 458 | 611 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002457770.1 | 0 | 1 | 154 | 440 | 593 | hypothetical protein SORBIDRAFT_03g013300 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
FL974270 | 155 | 1 | 155 | 0 |
JG835270 | 155 | 1 | 155 | 0 |
JG910618 | 155 | 1 | 155 | 0 |
FL968766 | 155 | 1 | 155 | 0 |
FE631121 | 155 | 1 | 155 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|