y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00012285m |
Family | GT31 |
Protein Properties | Length: 173 Molecular Weight: 19760.9 Isoelectric Point: 6.6524 |
Chromosome | Chromosome/Scaffold: 086501 Start: 1 End: 1923 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 1 | 121 | 0 |
MKTLAICEYGVNVVSAKYVMKCDDDTFVRLDSVVAEIKKVPSGRSLYIGSMNIQHKPLRHGKWAVTYEEWPEEVYPAYANGPGYVLSSDIAHFIMSEFTK QGLTLFKMEDVSMGLWVEQFN |
Full Sequence |
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Protein Sequence Length: 173 Download |
MKTLAICEYG VNVVSAKYVM KCDDDTFVRL DSVVAEIKKV PSGRSLYIGS MNIQHKPLRH 60 GKWAVTYEEW PEEVYPAYAN GPGYVLSSDI AHFIMSEFTK QGLTLFKMED VSMGLWVEQF 120 NRTIPVEYIH SAKFCPYGCI DDYYTAHYQS PRLMLCMWEK LLEGRPGCCS VR* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03193 | PLN03193 | 0.001 | 2 | 135 | 142 | + beta-1,3-galactosyltransferase; Provisional | ||
pfam01762 | Galactosyl_T | 2.0e-16 | 2 | 118 | 124 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03133 | PLN03133 | 5.0e-59 | 2 | 172 | 175 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ03101.1 | 0 | 1 | 172 | 504 | 675 | hypothetical protein OsI_25245 [Oryza sativa Indica Group] |
GenBank | EEE66740.1 | 0 | 1 | 172 | 462 | 633 | hypothetical protein OsJ_23432 [Oryza sativa Japonica Group] |
RefSeq | NP_001051614.1 | 0 | 1 | 172 | 484 | 655 | Os03g0803900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001059116.1 | 0 | 1 | 172 | 492 | 663 | Os07g0195200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130993.1 | 0 | 1 | 172 | 275 | 446 | hypothetical protein LOC100192098 [Zea mays] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JK578543 | 173 | 1 | 173 | 0 |
JK578544 | 173 | 1 | 173 | 0 |
JG965433 | 173 | 1 | 173 | 0 |
JG893064 | 173 | 1 | 173 | 0 |
HO294918 | 165 | 1 | 165 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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