y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.017G139100.3 |
Family | GT4 |
Protein Properties | Length: 816 Molecular Weight: 92398.8 Isoelectric Point: 6.4653 |
Chromosome | Chromosome/Scaffold: 17 Start: 14732088 End: 14736491 |
Description | sucrose synthase 5 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 557 | 724 | 0 |
EDKKKPIIFSMARLDTVKNLTGLTEWYGKNKRLRGLVNLVIVGGFFDPNKSKDREEMAEIKKMHELIEKYQLKGQIRWIAAQTDRKRNGELYRCIADTKG AFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPSEIIVDGISGFHIDPKNGDESSNIIADFFEKCKVD |
Full Sequence |
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Protein Sequence Length: 816 Download |
MATLKRSDSI ADNMPEALKQ SRYHMKKCFA KYIEKGRRTM KLQQLLDEME NVIDDQVERT 60 RVLEGLLGDI WFSIQEAVVN PPYVAFSIRP SPGFWEYVKV NSANLSVEGI TVTDYLKFKE 120 MIYDENWAKD ANALEVDFGA FDFSVPHLTL SSSIGNGLGF VSKFVTSKLS GRLENAQPLV 180 DYLLSLNRQG EKLMINETLG TVGKLQMALI VAEVYLSGLA KDTPYQNFEI SFKEWGFEKG 240 WGDTAERVKE TMRCLSEVLQ APDPMNMEKF LSRLPTVFNV VIFSPHGYFG QADVLGLPDT 300 GGQVVYILDQ VKALEEELLL RIKQQGLNVK PQIVVATRLI PDARGTTCNL EFEAIDGTKY 360 SNILRVPFRV ENRVLRQWVS RFDEVTTKIL DLMEGKPDLI IGNYTDGNFA ATLMAGKLGI 420 TQATIAHALE KTKYENSDVK WKELESKYHF PCQFMADIVA MNATDFIIAS TYQEIAGSKD 480 RTGQYESHAA FTLPGLCRVV SGVNVFDPKF NIAAPGADQS VYFPHTEKQS RFTQFNPDIE 540 ELLYSKVVND EHIGYLEDKK KPIIFSMARL DTVKNLTGLT EWYGKNKRLR GLVNLVIVGG 600 FFDPNKSKDR EEMAEIKKMH ELIEKYQLKG QIRWIAAQTD RKRNGELYRC IADTKGAFVQ 660 PALYEAFGLT VIEAMNCGLP TFATNQGGPS EIIVDGISGF HIDPKNGDES SNIIADFFEK 720 CKVDPGHWNK YSLEGLKRIN ECYTWKIYAN KLLNMGNVYS FWRQLNKEQK LAKQRYIQLF 780 FNLKFRELVQ SVPIPTEEAQ TPVSEPTART QSSAR* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 3.0e-58 | 280 | 755 | 491 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 5.0e-110 | 279 | 753 | 479 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 1 | 802 | 812 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 22 | 793 | 783 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 6 | 545 | 551 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27338.1 | 0 | 3 | 815 | 6 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002267020.1 | 0 | 3 | 814 | 6 | 827 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305240.1 | 0 | 1 | 788 | 1 | 788 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327452.1 | 0 | 1 | 815 | 1 | 815 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532791.1 | 0 | 2 | 812 | 6 | 795 | sucrose synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 4 | 800 | 8 | 810 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
PDB | 3s29_G | 0 | 4 | 800 | 8 | 810 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
PDB | 3s29_F | 0 | 4 | 800 | 8 | 810 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
PDB | 3s29_E | 0 | 4 | 800 | 8 | 810 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
PDB | 3s29_D | 0 | 4 | 800 | 8 | 810 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794519 | 805 | 4 | 797 | 0 |
BU103683 | 805 | 3 | 797 | 0 |
CX109054 | 598 | 103 | 690 | 0 |
FG227316 | 455 | 277 | 720 | 0 |
HO410243 | 615 | 186 | 789 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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