y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10001468 |
Family | GT4 |
Protein Properties | Length: 915 Molecular Weight: 104479 Isoelectric Point: 6.0192 |
Chromosome | Chromosome/Scaffold: 133 Start: 80059 End: 85126 |
Description | sucrose synthase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 570 | 737 | 1.4013e-45 |
DRSKPILFSMARLDRVKNMTGLVESYGKNTKLREVANLVVVAGYIDVKKSKDREEMEEIEKMHNLMKTYDLSGQFRWITAQTNRARNGEIYRYIADTRGA FVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGVSGFHIDPYHPGQNAAQMADFFQQCKEDP |
Full Sequence |
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Protein Sequence Length: 915 Download |
MDNHKLGRIS STRERVEDTL SAYRNHLLSL LSRYVDQGKG ILQPHNLIDE LDNIVCDDKE 60 ARETLRNCPF GEVLESAQEA IVLPPFIAIA VRPRPGVWEY VRVNVNELSV DQLTVSEYLK 120 FKEELVDGQA NDPYALELDM EPFNASFPRP SRSSSIGNGA QFLNRHLSSI MFRSKDCLEP 180 LLDFLRAHKY KGHGLMLNER VQSVSRLQSV LAKAEEYISK LPPDTPYSEF EFDVQGMGFE 240 IGWGDTAERT IETMHLLLDI LQAPDPSTLE TFLGRVPMVF NVVILSPHGY FGQANVIGMP 300 DTGGQVVYIL DQVRALESEM LLRIKKQGLD FKPRILIVTR LIPDAKGTTC NQHMERISGT 360 EYTHILRVPF RSENGILRKW ISRFDVWPYL ETFAEDVASE IVAELQAIPD FIIGNYSDGN 420 LVASLLAYKL GVTQCTIAHA LEKTKYPDSD LYWKKFDEKY HFSCQFTADL LAMNNADFII 480 TSTYQEIAGT KHTVGQYESH TAFTLPGQYR VVHGIDVFDP KFNIVSPGAD MSIYFPYFEK 540 QKRLTALHAP IEKMLFDPDQ TDDWIGTIDD RSKPILFSMA RLDRVKNMTG LVESYGKNTK 600 LREVANLVVV AGYIDVKKSK DREEMEEIEK MHNLMKTYDL SGQFRWITAQ TNRARNGEIY 660 RYIADTRGAF VQPAFYEAFG LTVVEAMTCG LPTFATLHGG PAEIIEHGVS GFHIDPYHPG 720 QNAAQMADFF QQCKEDPSYW NKISEGGLKR IYERYTWKIY SERLMTLAGV YSFWKHVSKL 780 ERQEPRRYLE MFYILKFRDL SKLEWRVEVE SDSLLPVQLL QSDYVAGHPL EVYVRDILRL 840 QQGDWQCRIK HVKREANFVA DALAKMGHEF KNGKKWFPFP PPGVVDAVDA DKTGKRYRRG 900 ACGPAETLPA EEPD* 960 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 1.0e-63 | 282 | 768 | 497 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 1.0e-124 | 281 | 766 | 487 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 1 | 802 | 802 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 24 | 802 | 780 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 8 | 556 | 549 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAA88904.1 | 0 | 5 | 802 | 5 | 801 | sucrose synthase [Citrus unshiu] |
DDBJ | BAA88981.1 | 0 | 5 | 802 | 5 | 801 | sucrose synthase [Citrus unshiu] |
Swiss-Prot | O24301 | 0 | 1 | 802 | 1 | 802 | SUS2_PEA RecName: Full=Sucrose synthase 2; AltName: Full=Sucrose-UDP glucosyltransferase 2 |
RefSeq | XP_002271896.1 | 0 | 5 | 802 | 5 | 801 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302727.1 | 0 | 1 | 802 | 1 | 801 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 6 | 802 | 8 | 800 | A Chain A, Pyrococcus Horikoshii Acylaminoacyl Peptidase (orthorhombic Crystal Form) |
PDB | 3s29_G | 0 | 6 | 802 | 8 | 800 | A Chain A, Pyrococcus Horikoshii Acylaminoacyl Peptidase (orthorhombic Crystal Form) |
PDB | 3s29_F | 0 | 6 | 802 | 8 | 800 | A Chain A, Pyrococcus Horikoshii Acylaminoacyl Peptidase (orthorhombic Crystal Form) |
PDB | 3s29_E | 0 | 6 | 802 | 8 | 800 | A Chain A, Pyrococcus Horikoshii Acylaminoacyl Peptidase (orthorhombic Crystal Form) |
PDB | 3s29_D | 0 | 6 | 802 | 8 | 800 | A Chain A, Pyrococcus Horikoshii Acylaminoacyl Peptidase (orthorhombic Crystal Form) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794519 | 802 | 1 | 802 | 0 |
BU103683 | 812 | 6 | 816 | 0 |
CX109054 | 607 | 104 | 710 | 0 |
FG227316 | 454 | 279 | 732 | 0 |
HO410243 | 624 | 186 | 801 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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