y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10013417 |
Family | GT4 |
Protein Properties | Length: 745 Molecular Weight: 85379.5 Isoelectric Point: 6.3119 |
Chromosome | Chromosome/Scaffold: 230 Start: 114063 End: 118050 |
Description | sucrose synthase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 500 | 668 | 0 |
LDDRSKPILFSMARLDHVKNITGLVECYCKNTKLRELVNLVVVAGYIDASKSKDREEIEEIEKMHSLMKEYGLNGQFRWITSQTNRARNGELYRYIADTR GAFVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGVSGFHIDPYHPDQTAAQIADFFELCKED |
Full Sequence |
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Protein Sequence Length: 745 Download |
MANPKLGRNL SIRDRVEDTL SAHRNQLVSL LSRYVEQGKG ILQPHNLLDE LDNVICDEQD 60 RETLRNGPFS EVLKSAMEAI VLPPFVAIAV RPRPGVWEYV RVNVHELSVD QLTISEYLQF 120 KEELVDGQSN DPYVLELDLE PFNASFPRPN RSSSIGNGVQ FLNRHLSSNM FRNKDSLEPL 180 LEFLRAHKYK GHALMLNDRI QSVSRLQSAL AKAEDYISKL PLDTPYAEFE YAIQGMGFER 240 GWGDTAERTM EMMHLLLDIL QAPDPSTLET FLGRVPMVFN VVILSPHGYF GQANVLGLPD 300 TGGQIVYILD QVRALEHEML LRIKKQGLDF KPRILVVTRL IPDAKGTTCN QRLERISGTE 360 YTHILRCTIA HALEKTKYPN SDLYWKKFDE KYHFSCQFTA DLLAMNNADF IITSTYQEIA 420 GTKTTVGQYE SHTAFTLPGL YRVVHGIDVF DPKFNIVSPG ADMSIYFPFY EKQKRLTSLH 480 ASLEKMLYDP EQNDEWIGTL DDRSKPILFS MARLDHVKNI TGLVECYCKN TKLRELVNLV 540 VVAGYIDASK SKDREEIEEI EKMHSLMKEY GLNGQFRWIT SQTNRARNGE LYRYIADTRG 600 AFVQPAFYEA FGLTVVEAMT CGLPTFATLH GGPAEIIEHG VSGFHIDPYH PDQTAAQIAD 660 FFELCKEDPS YWNKISDGGL QRIYDRYTWK IYSERLMTLA GVYGFWKHVS KLERRETRRY 720 LEMFYILKFR DLTKTVPLAI DDHH* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00142 | PLN00142 | 0 | 364 | 744 | 381 | + sucrose synthase | ||
PLN00142 | PLN00142 | 0 | 1 | 366 | 366 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 367 | 739 | 373 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
TIGR02470 | sucr_synth | 0 | 24 | 366 | 343 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 11 | 366 | 356 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC28175.1 | 0 | 1 | 733 | 1 | 788 | T2H3.8 [Arabidopsis thaliana] |
EMBL | CAB38022.1 | 0 | 1 | 741 | 1 | 808 | sucrose synthase [Craterostigma plantagineum] |
RefSeq | NP_192137.1 | 0 | 1 | 742 | 1 | 809 | SUS3 (sucrose synthase 3); UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002302727.1 | 0 | 1 | 744 | 1 | 811 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523115.1 | 0 | 1 | 744 | 1 | 775 | sucrose synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 364 | 742 | 431 | 808 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3s29_H | 0 | 1 | 366 | 1 | 366 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3s29_G | 0 | 364 | 742 | 431 | 808 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3s29_G | 0 | 1 | 366 | 1 | 366 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3s29_F | 0 | 364 | 742 | 431 | 808 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794519 | 809 | 1 | 741 | 0 |
GT036289 | 336 | 406 | 741 | 0 |
GT043260 | 327 | 419 | 745 | 0 |
HO484510 | 381 | 363 | 743 | 0 |
HO484510 | 37 | 313 | 348 | 0.00000002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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