y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma16g34290.1 |
Family | GT4 |
Protein Properties | Length: 921 Molecular Weight: 103906 Isoelectric Point: 7.1062 |
Chromosome | Chromosome/Scaffold: 16 Start: 36921331 End: 36926993 |
Description | sucrose synthase 6 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 573 | 742 | 0 |
EDMKKPIIFSMARLDKVKNLSGLVEWYARNKRLRSLVNLVVVGGFFNPAKSKDREETEEIKKMHFLMKEYNLKGQFRWIAAQTDRYRNSELYRCISDTKG AFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEKCKTDSQ |
Full Sequence |
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Protein Sequence Length: 921 Download |
MASTAPNSAL KRSDSITDSM PEALKQSRFH MKRCFARFVA SGKRLMKQQH VMDDVEKTVE 60 DKAERKKFLD GMLGYIFSCT QEAAVVPPYV AFAVRPNPGF WEYIKVNADD LQVEGIEAVE 120 YLKYKEMIFD EKWANDENAL ELDFGAIDFS TPQMVLSSSI GNGLNFTTKI LTSRLSGSSQ 180 SINPLLDYLL SLNYQGENLM IKDTLNTMPK LQQALKVAEA YVSALNKDTA YQKFEDRFKE 240 WGFDKGWGNT AGRVKETMKL LSEVLESADP VKLESLFSRL PNMFNIVILS IHGYFGQADV 300 LGLPDTGGQV VYILDQVRAL EEELLHKIEL QGLDVKPQIL VVTRLIPDAK GTTCNQELEP 360 VTNTKHSNIL RVPFYTDKGM LRQWVSRFDI YPYLERFSQD ATAKIFDLME DKPDLIIGNY 420 TDGNLVSSLM ASKLGVTQAT IAHALEKTKY EDSDAKWMAF DEKYHFSCQF TADIISMNAA 480 DFIITSTYQE IAGSKQKPGQ YETHTAFTMP GLCRAVSGIN VFDPKFNIAA PGADQSVYFP 540 STAKEQRLTS FHPAIEELLY SKDDNEEHIG LLEDMKKPII FSMARLDKVK NLSGLVEWYA 600 RNKRLRSLVN LVVVGGFFNP AKSKDREETE EIKKMHFLMK EYNLKGQFRW IAAQTDRYRN 660 SELYRCISDT KGAFVQPALY EAFGLTVIEA MNCGLPTFAT NQGGPAEIIV DGVSGFHIDP 720 YNGDESSDKI ADFFEKCKTD SQHWNRMSKA GLQRINECYT WKIYAKKVLN MGSIYGFWRR 780 LNREQKLAKE RYIHMFYNLQ FRNLAKQVPI PSETPQDPTQ MPKPSAPAPS RRSAAKARPK 840 KVSEHWIVGA PLTLLTAAAT PKIKDHPTPS GEGVSEGTAT SEQSGGGGLF GLRWLVPIIA 900 FVCAIHYFLK NLDRLFTREQ * 960 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 5.0e-61 | 286 | 771 | 496 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 1.0e-116 | 285 | 769 | 485 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 4 | 819 | 816 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 28 | 809 | 783 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 12 | 561 | 550 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27338.1 | 0 | 5 | 832 | 2 | 835 | unnamed protein product [Vitis vinifera] |
EMBL | CBI35298.1 | 0 | 2 | 839 | 3 | 841 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002267020.1 | 0 | 5 | 819 | 2 | 816 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002270861.1 | 0 | 2 | 839 | 3 | 841 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002526290.1 | 0 | 5 | 844 | 2 | 850 | sucrose synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 10 | 813 | 8 | 807 | A Chain A, Crystal Structure Of Putative D-Isomer Specific 2-Hydroxyacid Dehydrogenase, Nad-Binding From Polaromonas Sp. Js6 66 |
PDB | 3s29_G | 0 | 10 | 813 | 8 | 807 | A Chain A, Crystal Structure Of Putative D-Isomer Specific 2-Hydroxyacid Dehydrogenase, Nad-Binding From Polaromonas Sp. Js6 66 |
PDB | 3s29_F | 0 | 10 | 813 | 8 | 807 | A Chain A, Crystal Structure Of Putative D-Isomer Specific 2-Hydroxyacid Dehydrogenase, Nad-Binding From Polaromonas Sp. Js6 66 |
PDB | 3s29_E | 0 | 10 | 813 | 8 | 807 | A Chain A, Crystal Structure Of Putative D-Isomer Specific 2-Hydroxyacid Dehydrogenase, Nad-Binding From Polaromonas Sp. Js6 66 |
PDB | 3s29_D | 0 | 10 | 813 | 8 | 807 | A Chain A, Crystal Structure Of Putative D-Isomer Specific 2-Hydroxyacid Dehydrogenase, Nad-Binding From Polaromonas Sp. Js6 66 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |