y
Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.010G091800.1 |
Family | GT4 |
Protein Properties | Length: 797 Molecular Weight: 90325.8 Isoelectric Point: 6.4333 |
Chromosome | Chromosome/Scaffold: 10 Start: 14533303 End: 14537228 |
Description | sucrose synthase 4 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT4 | 556 | 722 | 0 |
LKDRNKPILFTMARLDRVKNLTGLVEFYAKNSRLRELVNLVVVGGDRRKESKDLEEKAEMKKMYELIEKYKLNGQFRWISSQMNRVRNGELYRYICDTKG AFVQPAIYEAFGLTVVEAMTCGLPTFATCYGGPAEIIVHGKSGFNIDPYNGDLAAETLANFFEKCKA |
Full Sequence |
---|
Protein Sequence Length: 797 Download |
MASISVCERL GESLATHPQQ AKSILSRIES LGKGIHKSQK LLSVLDKEAG NQALDGMVVE 60 VLRSTQEAVV SSPLVALAIR SAPGVWEYIA LEFQKLFVEE MPVAEYLRLK EELVDGSSNG 120 EFMLELDFGA FNNSVPRPSL SKSIGNGMDF LNRHLSAKLF QDKENLNLLL EFLQIRCQKG 180 KGMLLNDRIQ DVNSLQHALR KAEEYLTPLS SDTPYSVFEK RFLGIGLEKG WGDNAEHVLE 240 MIHLLLDLLQ APDPVALESF LGRIPLVANV VIMTPHGYFA QDNVLGYPDT GGQVVYILDQ 300 VRALEEELLH RFKLQGLDIT PRILVITRLL PDAVGTTCGQ RLEKVYGTKY SDILRVPFRT 360 EKGIVRPWIS RFKVWPYLET YTKDVAAEIT KEFQGKPDLI VGNYSDGNIV ASLLAHKFDV 420 TQCSIAHALE KTKYPDSDIN WKQLEDKYHF SCQFTADLIA MNHTDFIITS TFQEIAGSKD 480 TLGQYESHIA FTLPGLYRVV DGIDVFDPKF NIVSPGADMS IYFPYTEEKR RLKKFHPEIE 540 ELLYSPVENT EHLCVLKDRN KPILFTMARL DRVKNLTGLV EFYAKNSRLR ELVNLVVVGG 600 DRRKESKDLE EKAEMKKMYE LIEKYKLNGQ FRWISSQMNR VRNGELYRYI CDTKGAFVQP 660 AIYEAFGLTV VEAMTCGLPT FATCYGGPAE IIVHGKSGFN IDPYNGDLAA ETLANFFEKC 720 KADPSYWDEI SQGGLKRIQE KYTWQIYSEK LLTLTGVYGF SKHVAYQEQR GRKRYIEMLH 780 ALMYNNRVKT APLAVE* 840 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 8.0e-62 | 270 | 754 | 494 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 5.0e-120 | 269 | 753 | 486 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 3 | 796 | 800 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 18 | 794 | 784 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 5 | 545 | 546 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD28641.1 | 0 | 5 | 796 | 11 | 806 | sucrose synthase [Gossypium hirsutum] |
GenBank | ABD96570.1 | 0 | 5 | 796 | 11 | 805 | sucrose synthase [Manihot esculenta] |
GenBank | ACV72640.1 | 0 | 5 | 796 | 11 | 805 | sucrose synthase 1 [Gossypium hirsutum] |
DDBJ | BAA88905.1 | 0 | 5 | 796 | 11 | 805 | sucrose synthase [Citrus unshiu] |
DDBJ | BAA89049.1 | 0 | 5 | 796 | 11 | 805 | sucrose synthase [Citrus unshiu] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 8 | 794 | 16 | 805 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 3s29_G | 0 | 8 | 794 | 16 | 805 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 3s29_F | 0 | 8 | 794 | 16 | 805 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 3s29_E | 0 | 8 | 794 | 16 | 805 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 3s29_D | 0 | 8 | 794 | 16 | 805 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO794519 | 796 | 5 | 797 | 0 |
BU103683 | 796 | 5 | 796 | 0 |
CX109054 | 595 | 95 | 689 | 0 |
FG227316 | 453 | 267 | 719 | 0 |
GW837855 | 430 | 315 | 744 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|