y
Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01029388001 |
Family | GT4 |
Protein Properties | Length: 907 Molecular Weight: 102720 Isoelectric Point: 7.7551 |
Chromosome | Chromosome/Scaffold: 17 Start: 15994779 End: 15999389 |
Description | sucrose synthase 6 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 571 | 742 | 0 |
SDRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRSLVNLVVVAGFFDPSKSKDREEIAEIKKMHSLIEKYQLKGQLRWIAAQNDRNRNGELYRCIADTKG AFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIFDGVSGFHIDPSNGDESSDKIADFFEKCKTDSEYW |
Full Sequence |
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Protein Sequence Length: 907 Download |
MASSSAPVIK QQDIADTMPD ALKQSRYHMK RCFARFVGSG RRLMKYRHIM EEIEKSIEDK 60 AERSRVMDGL LGYILNTTQE AAVVPPYVAF AVRPSPGLWE FVKVSADDLG VDGITSAEYL 120 KFKETIFDEN WATDENTLEI DFGAFDYSTP HLTLNSSIGN GLNYVSKFMT SKLSGSSENA 180 KPLVEYLLAM NHQGESLMIN EMLNTVSKLQ TALIVAEVFV SSLPKDTPYQ SFEQRLKDWG 240 FEKGWGDSAE RVKDTMRTLS EVLQAPDPMK MELLFSRLPN MFNIVVFSPH GYFGQADVLG 300 LPDTGGQVVY ILDQVKALEE ELLHRIKQQG LIVKPQILVV TRLIPDARGT KCDQEIEPVL 360 NTKHSHILRV PFRTENGVLR QWVSRFDIYP YLERYAQDAS AKILAHMECK PDLIIGNYTD 420 GNMVASLMAS KLGVTQGTIA HALEKTKYED SDVKWKELDG KYHFSCQFTA DMFAMNATDF 480 IITSTFQEIA GSKDRPGQYE NHAAFTMPGL CRVVSGINVF DTKFNIAAPG ADQSVYFPYM 540 EKQKRLTSFH PAIEELLYSK EDNKEHLGYL SDRKKPIIFS MARLDTVKNI TGLTEWYGKN 600 KRLRSLVNLV VVAGFFDPSK SKDREEIAEI KKMHSLIEKY QLKGQLRWIA AQNDRNRNGE 660 LYRCIADTKG AFVQPALYEA FGLTVIEAMN CGLPTFATNQ GGPAEIIFDG VSGFHIDPSN 720 GDESSDKIAD FFEKCKTDSE YWNKISTAGL QRIYECYTWK IYATKVLNMG STYGFWRQLN 780 KDQKNAKNRY LQLFYNLQFR KLAKGVPILN EEPREEPQQP AATAITKPQQ PAPTEGAKPR 840 PSAPTTAPKP QPAARRPQSG VQRVNEGLDQ KQPGLPTRIR AFCPWLWWFF IINISLFLIW 900 YLLMKL* 960 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 9.0e-63 | 284 | 769 | 497 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 4.0e-113 | 283 | 767 | 485 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 3 | 808 | 807 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 26 | 807 | 783 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 14 | 559 | 546 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN64012.1 | 0 | 1 | 856 | 1 | 848 | hypothetical protein [Vitis vinifera] |
EMBL | CBI35298.1 | 0 | 1 | 880 | 1 | 880 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002270861.1 | 0 | 1 | 880 | 1 | 878 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002329693.1 | 0 | 4 | 802 | 2 | 801 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526290.1 | 0 | 4 | 849 | 2 | 846 | sucrose synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 1 | 812 | 1 | 808 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3s29_G | 0 | 1 | 812 | 1 | 808 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3s29_F | 0 | 1 | 812 | 1 | 808 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3s29_E | 0 | 1 | 812 | 1 | 808 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3s29_D | 0 | 1 | 812 | 1 | 808 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |