PROTEIN: VatanenT_2016_SRR4305041_bin.1_k119_6601_80
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Protein File & Metadata
Source:
VatanenT_2016_SRR4305041_bin.1_k119_6601_80.pdb
Genome ID:
Protein ID:
VatanenT_2016_SRR4305041_bin.1_k119_6601_80
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Protein Sequence
MLLLLFVFSN SVNGRENFTA LNNMEILDVI NRHNCVKAIF SGHHHTGAFG YFNKIPCNTV 60 EGMIETPDQN SFGIVRIYKD RIELEGKGRM TSRLFELQP 99
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-I1KCA3-F1-model_v4 | 1 | 99 | 216 | 318 | 0.606 |
0.9456 |
| AF-Q5M886-F1-model_v4 | 1 | 99 | 234 | 336 | 0.6024 |
0.9512 |
| AF-Q99KS6-F1-model_v4 | 1 | 99 | 234 | 336 | 0.6018 |
0.9521 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7J5L8W7 | GH2 | 1 | 99 | 105 | 202 | 0.497 |
0.9563 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7J5L8W7 | GH2 | 1 | 99 | 105 | 202 | 0.497 |
0.9563 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A7YY53-F1-model_v4 | 1 | 99 | 234 | 336 | 0.6031 |
0.9523 |
| AF-Q5M886-F1-model_v4 | 1 | 99 | 234 | 336 | 0.6024 |
0.9512 |
| AF-Q99KS6-F1-model_v4 | 1 | 99 | 234 | 336 | 0.6018 |
0.9521 |
| AF-Q7T0Q0-F1-model_v4 | 1 | 99 | 246 | 348 | 0.5853 |
0.9381 |