PROTEIN: VatanenT_2016_SRR4305041_bin.1_k119_5559_18
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Protein File & Metadata
Source:
VatanenT_2016_SRR4305041_bin.1_k119_5559_18.pdb
Genome ID:
Protein ID:
VatanenT_2016_SRR4305041_bin.1_k119_5559_18
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Protein Sequence
MIKNYLLLGS LLWSVGAFSQ STVWRSKGWE ARVSDKGCLE QIVFKDKQGN DTIPFFRPGQ 60 GNCGPSFYAE IGGKEVTAAW IPDGYLSYRA TIDQVECRLT YHSWKGQPAL KVTLENKGNV 120 PFQPVKAGLK LGIDTYMDKY PDWFGKYFPT LMRNEKTHFY GYLQTPRGHA LGIVSPQPVA 180 SWSVAYNLGY QDPPPHWFMG HRIESLNLDL MNALPLPERN PQNLWMLKQG EVKTWTVAFI 240 DINPLGEFEQ AVYETTGIPM LRIDRTTYTP GETASFEVLS GSKDIKVLDD KGQEVKADIR 300 EQGKGAKRVS CVLPEVGLYK VRARDNGKET EGVLSVHHNW QWTMEQARRN ALKYHQKATS 360 HIESWYGFHP SFIAAQYFPD KKLDKALRDR FDYLFGLLHD QQKMEPKYHV SRIQNTSGTI 420 GLLVDKYQAY GDMADLQKAS RLADWLMNSW QREDGAYVNH NTIYTSVIYV AKSMLELTLA 480 ERELAKKDAA WAEVAERHYQ SAKRAIDQLV ASQGDFETEG ELTFEDGMIS CSALQIGMLG 540 LMQTDEKARK HYTDAMLQIL NSHDCLTQLR VPDARRRGGT MRYWEAQYDV QMLPNMFNSP 600 HGWSGWRGYA TYYAYLLTGE ERWLKETYNA MGAFSHLIDY RTGDLRWAFV VDPYLKVKQA 660 CSADTHVTQD SLSFGNPHPE LYDTREFVIG EQYVNMVSDW QTVNTQDNDV HEVFKCIAES 720 MLTNAFVIER QDGSVVGYNC TVDRQGDKLS VKADEKQITH LHCNLKKPHT VVFNKESKKL 780 DANYLGWAFG TDIYQSR 797
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175WG55-F1-model_v4 | 17 | 796 | 26 | 879 | 0.7032 |
0.7696 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5P8M7F3-F1-model_v4 | PL27 | 26 | 755 | 1 | 629 | 0.7559 |
0.8526 |
| AF-A0A2S0KVT5-F1-model_v4 | PL27 | 21 | 739 | 1 | 663 | 0.7555 |
0.8334 |
| AF-A0A6I5ZZU4-F1-model_v4 | PL27 | 17 | 760 | 29 | 716 | 0.751 |
0.8318 |
| AF-Q5AWT9-F1-model_v4 | PL27 | 1 | 741 | 1 | 724 | 0.7492 |
0.7961 |
| AF-F5Y9B7-F1-model_v4 | PL27 | 20 | 794 | 1 | 619 | 0.748 |
0.8492 |
| E3QS34 | PL27 | 16 | 789 | 1 | 702 | 0.7476 |
0.8047 |
| AF-A0A0P0M2G6-F1-model_v4 | PL27 | 23 | 726 | 22 | 690 | 0.7464 |
0.8325 |
| AF-A0A413RT83-F1-model_v4 | PL27 | 23 | 740 | 22 | 690 | 0.7461 |
0.8321 |
| AF-A6L332-F1-model_v4 | PL27 | 23 | 740 | 22 | 690 | 0.746 |
0.8318 |
| A0A174T7R5 | PL27 | 23 | 740 | 22 | 690 | 0.7457 |
0.8315 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5P8M7F3 | PL27 | 26 | 755 | 1 | 629 | 0.7559 |
0.8526 |
| A0A2S0KVT5 | PL27 | 21 | 739 | 1 | 663 | 0.7555 |
0.8334 |
| A0A6I5ZZU4 | PL27 | 17 | 760 | 29 | 716 | 0.751 |
0.8318 |
| Q5AWT9 | PL27 | 1 | 741 | 1 | 724 | 0.7492 |
0.7961 |
| F5Y9B7 | PL27 | 20 | 794 | 1 | 619 | 0.748 |
0.8492 |
| E3QS34 | PL27 | 16 | 789 | 1 | 702 | 0.7476 |
0.8047 |
| A0A174T7R5 | PL27 | 23 | 740 | 22 | 690 | 0.7457 |
0.8315 |
| C7Q3H3 | PL27 | 15 | 754 | 7 | 680 | 0.7451 |
0.8206 |
| A0A416I060 | PL27 | 21 | 756 | 7 | 651 | 0.744 |
0.8342 |
| A0A3D9KEZ8 | PL27 | 20 | 724 | 1 | 693 | 0.7437 |
0.8038 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 27 | 724 | 1 | 669 | 0.7442 |
0.8182 |
| 5nok-assembly1.cif.gz_A | 27 | 724 | 5 | 668 | 0.7386 |
0.8172 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.