PROTEIN: ShaoY_2019_ERR3406195_bin.12_k141_4442_5
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Protein File & Metadata
Source:
ShaoY_2019_ERR3406195_bin.12_k141_4442_5.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3406195_bin.12_k141_4442_5
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Protein Sequence
MKKAMSLLTA TAMAATLLAG CGGGAASSSA APAADSTSTE ASSTAAEPAA DAAAEEGKVL 60 NIWCWNDEFQ SRFNDYYPGV KEIAADKSTT TLDNGVTVKW TINPNDNNNY QNKLDEALLK 120 QDSAAADDKI DIFLIEADYA LKYVDSEYTL DVKKDVGLTD DDLKDQYQYT KDIVTVDGVQ 180 KGTTWQATPG LFAYRRSIAK DVLGTDDPTE VQAALSDWDK FNDVAEKAAA KGYKMLSGYD 240 DSYRTFSNNV SAGWVDGTTV KVDPNIMNWV DQTKTYTDNG YNNKTSLWSD QWAADQGPAG 300 KVFGFFYSTW GINFTLLGNS LATPESEGGK QEVGNGIFGD YAVCQGPQPY YWGGTWICAA 360 AGTDNIPTIK DVMYSLTCDA DIMTKITEDT QDYTNCKSAM DSIAADPNFG SAFLGGQNHI 420 ALFAEVAPTI DMSNAGPYDQ GCNETFQSCF KDYFDGTVDL ETAKKNFEDQ IKVKYPELSS 480 VEWPA 485
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F2E6-F1-model_v4 | 13 | 479 | 29 | 436 | 0.699 |
0.804 |
| AF-P71619-F1-model_v4 | 54 | 479 | 33 | 428 | 0.6969 |
0.8174 |
| AF-A0A133CPC5-F1-model_v4 | 53 | 479 | 31 | 423 | 0.6966 |
0.8122 |
| AF-Q8DNN7-F1-model_v4 | 57 | 479 | 34 | 434 | 0.6865 |
0.7985 |
| AF-A0A132Z3C8-F1-model_v4 | 57 | 477 | 32 | 428 | 0.6836 |
0.7955 |
| AF-P9WGU9-F1-model_v4 | 56 | 479 | 31 | 465 | 0.6757 |
0.7707 |
| AF-A0A133CDW9-F1-model_v4 | 55 | 480 | 39 | 442 | 0.671 |
0.7819 |
| AF-K0EUI4-F1-model_v4 | 57 | 482 | 20 | 435 | 0.6237 |
0.7079 |
| AF-Q8DRJ6-F1-model_v4 | 56 | 483 | 61 | 500 | 0.5231 |
0.6205 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 1 | 478 | 258 | 866 | 0.534 |
0.6979 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 1 | 478 | 258 | 866 | 0.534 |
0.6979 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 56 | 476 | 1 | 393 | 0.8026 |
0.8979 |
| 3uor-assembly2.cif.gz_B | 58 | 480 | 1 | 389 | 0.7501 |
0.8523 |
| 6x84-assembly2.cif.gz_B | 55 | 479 | 1 | 411 | 0.7329 |
0.8104 |
| 4rk2-assembly1.cif.gz_A | 56 | 476 | 1 | 393 | 0.729 |
0.8205 |
| 6wpn-assembly1.cif.gz_A | 59 | 480 | 1 | 395 | 0.7287 |
0.8193 |
| 7vfq-assembly1.cif.gz_A | 57 | 482 | 1 | 394 | 0.7271 |
0.8182 |
| 7vfq-assembly2.cif.gz_B | 57 | 482 | 1 | 396 | 0.7258 |
0.815 |
| 2z8d-assembly2.cif.gz_B | 52 | 482 | 1 | 399 | 0.7257 |
0.8126 |
| 7vfr-assembly1.cif.gz_A | 57 | 482 | 1 | 397 | 0.7257 |
0.814 |
| 7c6z-assembly1.cif.gz_A | 58 | 479 | 1 | 415 | 0.7257 |
0.7975 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29822-F1-model_v4 | 55 | 476 | 26 | 422 | 0.7468 |
0.8589 |
| AF-Q9KEE7-F1-model_v4 | 57 | 479 | 44 | 445 | 0.7105 |
0.8305 |
| AF-Q578M8-F1-model_v4 | 55 | 478 | 23 | 411 | 0.6945 |
0.8073 |
| AF-O31518-F1-model_v4 | 52 | 478 | 29 | 427 | 0.6825 |
0.7902 |
| AF-Q926H8-F1-model_v4 | 57 | 479 | 20 | 428 | 0.6757 |
0.7674 |
| AF-P9WGU9-F1-model_v4 | 56 | 479 | 31 | 465 | 0.6757 |
0.7707 |
| AF-P9WGU8-F1-model_v4 | 57 | 479 | 32 | 465 | 0.6753 |
0.772 |
| AF-O32156-F1-model_v4 | 54 | 479 | 25 | 422 | 0.6704 |
0.7733 |
| AF-Q8YCA7-F1-model_v4 | 57 | 479 | 25 | 433 | 0.6671 |
0.7606 |
| AF-Q2YKR5-F1-model_v4 | 57 | 479 | 25 | 433 | 0.6657 |
0.7592 |