PROTEIN: ShaoY_2019_ERR3406085_bin.8_k141_10739_60
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Protein File & Metadata
Source:
ShaoY_2019_ERR3406085_bin.8_k141_10739_60.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3406085_bin.8_k141_10739_60
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Protein Sequence
MAVKYDNEIE ALLNAAEQHH QCLARPKDKH LMRALAYRSN HAKPRLLFSP HCGVYVRQSY 60 WKGLSRRDQV LHIARAIAQL HPKWIFDSYT AAAIRGWNVS YELLDKLNIL APYQIQAKSI 120 ISRSAKHPAF ETVNGLRVST VPQTLRHCLR AEDLRISLPI ADSALRETGK SKGELIELVK 180 ADPTTARSRD FQRTIDVLSL ADSRSESGGE SIARATMIML GFATPDLQVE CRDPMNPSKV 240 IRVDFYWVLD DGTVIIGELD GKQKYIDPTM TKGKDLIEVL RNERLRESRL SVLGARIVRF 300 SYSDVLDTVY FARLLERYGV PRNTSGPFVS RTMILPPVRT DSDDVPPLEC YADLIAPYER 360 DTPH 364
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F3S7-F1-model_v4 | 14 | 345 | 1 | 300 | 0.7602 |
0.8721 |
| AF-K0F9B1-F1-model_v4 | 6 | 345 | 3 | 307 | 0.7541 |
0.8583 |
| AF-K0F032-F1-model_v4 | 10 | 345 | 1 | 301 | 0.7432 |
0.849 |
| AF-O53562-F1-model_v4 | 16 | 343 | 1 | 277 | 0.7195 |
0.8373 |
| AF-P71763-F1-model_v4 | 13 | 344 | 1 | 278 | 0.7111 |
0.8276 |
| AF-O69681-F1-model_v4 | 1 | 343 | 2 | 291 | 0.7087 |
0.8161 |
| AF-K0EUR6-F1-model_v4 | 17 | 343 | 1 | 303 | 0.7054 |
0.8165 |
| AF-P96837-F1-model_v4 | 10 | 322 | 1 | 282 | 0.704 |
0.8223 |
| AF-P9WLG5-F1-model_v4 | 30 | 343 | 1 | 266 | 0.6997 |
0.8345 |
| AF-K0EII9-F1-model_v4 | 16 | 343 | 10 | 315 | 0.6992 |
0.8192 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WLG5-F1-model_v4 | 30 | 343 | 1 | 266 | 0.6997 |
0.8345 |
| AF-P9WLG4-F1-model_v4 | 30 | 343 | 1 | 266 | 0.6964 |
0.8308 |