PROTEIN: ShaoY_2019_ERR3405992_bin.8_k141_673_13
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405992_bin.8_k141_673_13.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405992_bin.8_k141_673_13
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Protein Sequence
MIRDGKLKLS YTNIFLMVYS ILLATVTIMT QTYLSEIIPL SYYVIKYSGS IILLGLFLVG 60 NLKMNVRSIG KIALIMVCII GIYSCTGSTY LADLVVLILA CKNVDYDRLI RCDMKVRGFL 120 FLATFFLGRI GIISSANNIK DGFIRNSMGF THVNAFSLCA FILLCSYIYI NYNTISFKKI 180 ILMVLYILFV YQTARTETFL YISLIAVFAC IYLQHTFRKR KASIFLLKIL LVILVVSWLF 240 SICMMIWYDP SVSWMYALNK FLSGRLALMS SAYKEFGISN FGYLIQWVTT NQATSSLQLN 300 VVDNGVVRLL LTQGWIATIL LIGGLLLLFL YSMRVNNALC LILALFAIYG ISESGCYYVY 360 TNPFLIFLGQ ILYSRGQLHN TAMKEGDNGY DCVIKESYNN 400
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A2S058-F1-model_v4 | GH39 | 1 | 380 | 1 | 402 | 0.56 |
0.6244 |
| AF-A0A7L9SQD7-F1-model_v4 | GT4 | 12 | 394 | 25 | 404 | 0.5197 |
0.716 |
| B7AUF6 | GT4 | 8 | 378 | 15 | 380 | 0.4895 |
0.7158 |
Structural Homologs -
CAZyme-ID50
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.