PROTEIN: ShaoY_2019_ERR3405992_bin.8_k141_673_10
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405992_bin.8_k141_673_10.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405992_bin.8_k141_673_10
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Protein Sequence
MKILLCERSL KGHRKTYMEW LVKIPGIEFF ILAPENIGLD ETHFVKYDFL DGIKTIKSYF 60 TWVNQIKNIV KNNEIDVVHI LDGDSIMRWF GVGLRFSGAK KTLITYHHFF QGLLRKISYW 120 FMCFGKRKGC IAHTVSVANS LKHCGIKEVF RCEYPAFSFG SIVAKHPKEC QIKYGLPADV 180 PIIGIIGGMN KYKNIIPFLE IMQNCTQDFH ILICGKENDI TKNTISATVK PYADKVTMLI 240 KQLSDEEYEE AIVASDIIFC IYGYDFDGAS GPLTDGVCAK KLILSCRHGS LGKIVSDNLL 300 GITAECSDKK DMLKQTELAL ARAKEFKYGV QANSYRESLN PDYFIKSYRT IYYKSCKSKP 360 L 361
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0P9C7-F1-model_v4 | 1 | 354 | 2 | 365 | 0.8149 |
0.8538 |
| AF-Q7AQE2-F1-model_v4 | 1 | 359 | 2 | 384 | 0.8145 |
0.8623 |
| AF-Q58577-F1-model_v4 | 1 | 358 | 4 | 351 | 0.8114 |
0.851 |
| AF-X8F781-F1-model_v4 | 1 | 359 | 2 | 384 | 0.8038 |
0.8534 |
| AF-Q5FAD9-F1-model_v4 | 1 | 357 | 1 | 354 | 0.8029 |
0.8317 |
| AF-K0F8H2-F1-model_v4 | 1 | 361 | 1 | 375 | 0.8007 |
0.8402 |
| AF-Q0P9C9-F1-model_v4 | 1 | 359 | 1 | 376 | 0.8 |
0.8417 |
| AF-A0A0H3GSH7-F1-model_v4 | 1 | 358 | 6 | 381 | 0.7969 |
0.8431 |
| AF-Q7CQX6-F1-model_v4 | 1 | 358 | 2 | 377 | 0.7965 |
0.8392 |
| AF-K0EXF1-F1-model_v4 | 1 | 353 | 2 | 375 | 0.7961 |
0.8491 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6H1X1Q1-F1-model_v4 | GT4 | 1 | 355 | 1 | 348 | 0.9176 |
0.9469 |
| WHX80026.1 | GT0 | 1 | 356 | 2 | 347 | 0.8844 |
0.916 |
| A0A9E8JMB1 | GT4 | 1 | 354 | 3 | 375 | 0.8805 |
0.927 |
| AF-I0BSF8-F1-model_v4 | GT4 | 4 | 358 | 1 | 373 | 0.8676 |
0.9105 |
| AF-H6NE37-F1-model_v4 | GT4 | 1 | 358 | 3 | 378 | 0.8675 |
0.909 |
| AF-F8FCD6-F1-model_v4 | GT4 | 4 | 358 | 1 | 373 | 0.8666 |
0.9096 |
| AF-A0A1U6IZ33-F1-model_v4 | GT4 | 1 | 357 | 2 | 364 | 0.8426 |
0.8753 |
| AF-A0A6H3Q544-F1-model_v4 | GT4 | 1 | 354 | 1 | 391 | 0.8395 |
0.9043 |
| A0A0W0SBA0 | GT4 | 1 | 359 | 2 | 382 | 0.8302 |
0.8761 |
| AF-A0A5J6Z0M1-F1-model_v4 | GT4 | 1 | 357 | 26 | 413 | 0.8288 |
0.9081 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6H1X1Q1 | GT4 | 1 | 355 | 1 | 348 | 0.9176 |
0.9469 |
| A0A9E8JMB1 | GT4 | 1 | 354 | 3 | 375 | 0.8805 |
0.927 |
| A0A9X9HP74 | GT4 | 1 | 353 | 1 | 375 | 0.8721 |
0.9224 |
| H6NE37 | GT4 | 1 | 358 | 3 | 378 | 0.8675 |
0.909 |
| A0A0U2V7P4 | GT4 | 1 | 355 | 2 | 380 | 0.8617 |
0.9126 |
| A0A2P1S570 | GT4 | 1 | 359 | 1 | 343 | 0.8601 |
0.898 |
| D9S1K3 | GT4 | 5 | 357 | 1 | 372 | 0.8593 |
0.9059 |
| A0A7Z2ZPI0 | GT4 | 1 | 359 | 2 | 386 | 0.8465 |
0.9 |
| A0A1U6IZ33 | GT4 | 1 | 357 | 2 | 364 | 0.8426 |
0.8753 |
| A0A6H3Q544 | GT4 | 1 | 354 | 1 | 391 | 0.8395 |
0.9043 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3oka-assembly1.cif.gz_A | 1 | 357 | 2 | 378 | 0.8001 |
0.8475 |
| 7mi0-assembly1.cif.gz_A | 1 | 359 | 4 | 379 | 0.7998 |
0.8448 |
| 3mbo-assembly1.cif.gz_B | 1 | 358 | 2 | 368 | 0.7924 |
0.8306 |
| 2jjm-assembly1.cif.gz_B | 1 | 356 | 2 | 359 | 0.7912 |
0.8234 |
| 4xsp-assembly1.cif.gz_A | 1 | 356 | 2 | 365 | 0.7904 |
0.8278 |
| 3mbo-assembly4.cif.gz_G | 1 | 358 | 2 | 364 | 0.7897 |
0.8234 |
| 6kih-assembly2.cif.gz_B | 1 | 359 | 2 | 399 | 0.7877 |
0.8507 |
| 5d01-assembly1.cif.gz_B | 1 | 356 | 3 | 360 | 0.7857 |
0.8197 |
| 3mbo-assembly3.cif.gz_F | 1 | 358 | 2 | 368 | 0.7851 |
0.8233 |
| 5d00-assembly1.cif.gz_B | 1 | 356 | 3 | 361 | 0.7817 |
0.8172 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0P9C7-F1-model_v4 | 1 | 354 | 2 | 365 | 0.8149 |
0.8538 |
| AF-Q58577-F1-model_v4 | 1 | 358 | 4 | 351 | 0.8114 |
0.851 |
| AF-Q8KIU8-F1-model_v4 | 1 | 359 | 2 | 398 | 0.8109 |
0.8742 |
| AF-P71053-F1-model_v4 | 1 | 360 | 3 | 376 | 0.8105 |
0.8553 |
| AF-P9WMZ2-F1-model_v4 | 1 | 359 | 2 | 384 | 0.8042 |
0.854 |
| AF-Q8NNK8-F1-model_v4 | 1 | 357 | 5 | 381 | 0.8015 |
0.8512 |
| AF-Q0P9C9-F1-model_v4 | 1 | 359 | 1 | 376 | 0.8 |
0.8417 |
| AF-A0QRG8-F1-model_v4 | 1 | 361 | 1 | 372 | 0.7974 |
0.8328 |
| AF-P9WMZ3-F1-model_v4 | 1 | 358 | 2 | 384 | 0.7951 |
0.8477 |
| AF-Q48453-F1-model_v4 | 1 | 356 | 1 | 358 | 0.7907 |
0.8212 |