PROTEIN: ShaoY_2019_ERR3405931_bin.18_k141_6275_471
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405931_bin.18_k141_6275_471.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405931_bin.18_k141_6275_471
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Protein Sequence
MRMTKRITAV LLCAAMLVGT TACSGGGTST ASGSSTGSTA AASTTGTGSS KYKDFITVDV 60 FDGQANYQGK QSGWFAKIVK DKFNMELNII APNVAGGGDT LFQTRSAAGD LGDLVMTTTE 120 NGRLTQLVKA GLLMNMADLL KNEKSVSQYK DAIKDANKTA GANGTYCIPS SISALPADTS 180 SEGLEPTFGP YVRWDAYKAA GYPEMKNMDD LINVWEKMQQ SVTKSDSGKK TYALSLFKDW 240 DGNMMNNAKQ PTCFYGYDEL GFVLAKADGS DYQSIIDSNS MYNKVLKLFY KANQKGLVDP 300 ESTTQNYDTM NNKYKDGQVL FSFWPWLGQA AYNTTEHKNA GKGFMLAPID DMKIFSYGCV 360 PHGDSKNFVA IGSKAKDPQR MADFIDWLYS PEGIYDSAAQ TASSAGPKGL TWELKDGKPV 420 LTDFGKKALL GDGKVTVPAK WGTGTWTDGI SALNYKAVTQ VDIDPETKCP YTYTMWDSVL 480 EENKTALDTD WQKKMNAKTT MDYLQKSKQI IVAPGSGFVA PEASSDITTI RNQCKEVIVA 540 DSWKMIFAKD ESEFNSLLKD MQDTVKGLGY DQVLAVDMQN AKDQETAREN IAKTNGSSAS 600 SK 602
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DRJ6-F1-model_v4 | 4 | 590 | 27 | 514 | 0.6139 |
0.7093 |
| AF-A0A133CZN8-F1-model_v4 | 15 | 587 | 11 | 502 | 0.582 |
0.6651 |
| AF-A0A132Z3C8-F1-model_v4 | 28 | 574 | 21 | 427 | 0.575 |
0.7151 |
| AF-K0F002-F1-model_v4 | 52 | 576 | 46 | 439 | 0.5366 |
0.6934 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 43 | 587 | 42 | 506 | 0.6433 |
0.7703 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 43 | 587 | 42 | 506 | 0.6433 |
0.7703 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5xs8-assembly1.cif.gz_A | 52 | 584 | 1 | 474 | 0.7113 |
0.811 |
| 6jhx-assembly2.cif.gz_B | 44 | 587 | 1 | 483 | 0.6972 |
0.7898 |
| 4tqu-assembly1.cif.gz_Q | 44 | 589 | 1 | 492 | 0.6959 |
0.7829 |
| 5h6u-assembly1.cif.gz_A | 45 | 590 | 1 | 487 | 0.6948 |
0.7847 |
| 5g62-assembly2.cif.gz_B | 53 | 594 | 1 | 491 | 0.6939 |
0.7811 |
| 3vlw-assembly2.cif.gz_B | 44 | 590 | 1 | 489 | 0.6939 |
0.7829 |
| 5swa-assembly1.cif.gz_A | 52 | 590 | 1 | 448 | 0.6522 |
0.7617 |
| 5swb-assembly4.cif.gz_G | 54 | 593 | 1 | 453 | 0.6443 |
0.7502 |
| 6fth-assembly1.cif.gz_A | 44 | 590 | 1 | 496 | 0.6425 |
0.7229 |
| 3omb-assembly1.cif.gz_A | 49 | 586 | 4 | 503 | 0.6372 |
0.7168 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37966-F1-model_v4 | 41 | 586 | 29 | 502 | 0.6163 |
0.7228 |
| AF-A0A0H2URD6-F1-model_v4 | 41 | 594 | 39 | 538 | 0.6069 |
0.7032 |
| AF-Q7LYW7-F1-model_v4 | 37 | 577 | 32 | 450 | 0.5871 |
0.7289 |
| AF-D4GP35-F1-model_v4 | 15 | 576 | 16 | 459 | 0.5799 |
0.6912 |
| AF-O58758-F1-model_v4 | 22 | 576 | 8 | 420 | 0.5794 |
0.7049 |
| AF-Q795R2-F1-model_v4 | 40 | 587 | 35 | 498 | 0.5546 |
0.6628 |
| AF-P58300-F1-model_v4 | 45 | 576 | 52 | 433 | 0.545 |
0.7188 |
| AF-Q9V297-F1-model_v4 | 36 | 576 | 63 | 452 | 0.5442 |
0.7188 |