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PROTEIN: ShaoY_2019_ERR3405931_bin.18_k141_23610_19

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Protein File & Metadata
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Source:
ShaoY_2019_ERR3405931_bin.18_k141_23610_19.pdb
Genome ID:
ShaoY_2019_ERR3405931_bin.18
Protein ID:
ShaoY_2019_ERR3405931_bin.18_k141_23610_19

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKRTRITSMA   LASVLAASTL   LAGCGQTNTA   SSTAGSTAAA   SGKVNITLLN   SKSEIAKPLE 60
KAVETFNQTN   KDGITITMST   VSASSTVDET   MMSKYASGNP   CTINMVDPTN   IASYVSKSAD 120
LSSESWVSKI   SPSFTSTLEN   GGKVYAFPFA   VEGDGLIYNK   NTIEKATGKT   FDPSTVKSLT 180
DLEALYKKIQ   AGGVAPVQIS   HDDWSLASHY   LAYSYVTQGK   SDADYYKKLK   SGEASLKDNT 240
VYNGLLNLLD   LNGKYNIYKS   SPMSSDYNTS   DPKNIATGKA   AFWFNGVWVM   PNVSQFLTGD 300
HAKDELGFLP   LFADSKTSDS   IAAAVTKVML   VDNTKSTPEQ   RKAANTFFNW   LATDEAGQKA 360
LGTDMGIISA   FKDAKYTPDN   SLAKSLVSYI   NAGKTIGFAN   LSGDYSTKVG   AFVQQYLTGA 420
MNKDTLTKSI   DSYFQSAAWV   K 441
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8DNH8-F1-model_v4 36 441 26 418 0.7694 0.8565
AF-K0F2T2-F1-model_v4 13 441 9 422 0.7564 0.8066
AF-Q32AT3-F1-model_v4 39 441 20 434 0.7543 0.8367
AF-A0A133CPC5-F1-model_v4 38 441 30 423 0.7538 0.8403
AF-A0A0H3H458-F1-model_v4 39 441 20 433 0.7538 0.8362
AF-P0AG80-F1-model_v4 39 441 20 434 0.7536 0.8361
AF-Q7CPK0-F1-model_v4 39 441 20 434 0.7535 0.836
AF-A0A0H3GHK7-F1-model_v4 38 441 18 427 0.753 0.8309
AF-Q9HZ48-F1-model_v4 39 441 21 420 0.7522 0.8253
AF-A0A0H3GX53-F1-model_v4 39 441 21 428 0.7497 0.8249
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K8EJG7-F1-model_v4 CBM50 , CE4 34 441 27 416 0.7285 0.8163
A0A0M1Q963 GH43_11 27 441 20 496 0.6663 0.7703
AF-A0A1Q2TKJ3-F1-model_v4 GH49 1 441 1 797 0.6452 0.8353
AF-A0A7U1BNH7-F1-model_v4 GH10 38 441 25 738 0.6045 0.8295
A0A9Q8PNJ5 GH4 4 441 102 866 0.5683 0.7622
UJP10085.1 GH154 16 421 679 1169 0.4338 0.7167
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K8EJG7 CBM50 , CE4 34 441 27 416 0.7285 0.8163
K8E205 GH32 35 423 26 343 0.6725 0.8274
A0A0M1Q963 GH43_11 27 441 20 496 0.6663 0.7703
A0A1Q2TKJ3 GH49 1 441 1 797 0.6452 0.8353
A0A7U1BNH7 GH10 38 441 25 738 0.6045 0.8295
A0A9Q8PNJ5 GH4 4 441 102 866 0.5683 0.7622
UJP10085.1 GH154 16 421 679 1169 0.4338 0.7167
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6pql-assembly2.cif.gz_B 43 441 1 384 0.8063 0.8773
7ehp-assembly1.cif.gz_A 45 441 1 397 0.8052 0.8632
7ehp-assembly2.cif.gz_B 45 441 1 393 0.8008 0.8625
8art-assembly2.cif.gz_B 39 441 1 391 0.7993 0.8653
8art-assembly1.cif.gz_A 39 441 1 390 0.7981 0.8649
4zze-assembly2.cif.gz_B 43 440 1 376 0.7974 0.8747
3oo6-assembly2.cif.gz_B 42 441 1 390 0.7912 0.8556
3zkl-assembly1.cif.gz_A 39 438 1 396 0.7874 0.8468
3vxc-assembly1.cif.gz_A 45 433 1 398 0.7869 0.8613
3jzj-assembly1.cif.gz_A 41 441 1 387 0.783 0.852
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O32156-F1-model_v4 29 441 13 422 0.7847 0.8414
AF-Q2YKZ9-F1-model_v4 37 441 19 411 0.7777 0.8559
AF-Q578M8-F1-model_v4 38 441 20 411 0.7763 0.8562
AF-Q8FVS7-F1-model_v4 37 441 19 411 0.776 0.8541
AF-O34335-F1-model_v4 15 441 21 421 0.7691 0.8461
AF-Q98H33-F1-model_v4 33 440 14 417 0.7557 0.8194
AF-Q92KZ7-F1-model_v4 39 440 19 414 0.7557 0.831
AF-Q57IS0-F1-model_v4 39 441 20 434 0.755 0.8374
AF-Q9RUE8-F1-model_v4 39 441 18 420 0.755 0.8228
AF-Q5PJK8-F1-model_v4 39 441 20 434 0.7545 0.8369
Download Full SwissProt Results