PROTEIN: ShaoY_2019_ERR3405922_bin.6_k141_4649_148
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405922_bin.6_k141_4649_148.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405922_bin.6_k141_4649_148
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Protein Sequence
MGKTIYDATK DPKYSNPFID VDEPRERVLP DGTRLTYRYM HGGFEGTNLK FSFCFPPEEK 60 YRGRFFQYLS PFPGPNEEVA SLNKTGEDDV IAFSLQNGAY YVESNMGSKM MFGPSESPTS 120 LFETSAAAAE YSRVKAKEIY GCKRPFGYVF GGSGGGYKTM ACVENTNAWD GAAPYVIGSP 180 VSLPNTITMH AQGQRCLRRV FGKIVDALDA GGSGDMYEGL DDNEKAMLRE LTLMGFPPIT 240 WFMEAAGRID DGALPVLMPN IKAKDPQYFK DFWEVPGYMG ADPESSASRD RLQFRGIVRK 300 VHVPGTIEET SEIDGRNGVD DAWKKMLTDG KDAWIELEEV PQGDLYLGGV NITFETGDAK 360 GRQLLLGDIK GNCLVIGMCF GKEDLKGVLS AVKPGDELTL DNSDYIAAQS YYRHQVPSDP 420 AFHAWDQFRD EKGNPVLPQR DNVMGYSMTG VPPQDGDIQC KVMITQALMD ESTCPWCGDW 480 YKNKIKETKG TDENVRLYYM DRCLHGDTSS MESNMIINYM GALHQAILDL SDWVERGIEP 540 IPATVYERDG GLITPAETAG KRRGMQPLVS LYAQGGTCAH VKAGEEVHFT VHAEVPEGAG 600 EITAVDYDPV EISRLPGEKV FLNRADFTKY EKDGIHGADA EFTYVYDKPG TYMASVRVKS 660 NRHGDASDLF TQVKNLARVR VIVE 684
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6I6FG26-F1-model_v4 | CE1 | 14 | 675 | 539 | 943 | 0.4074 |
0.7761 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6I6FG26 | CE1 | 14 | 675 | 539 | 943 | 0.4074 |
0.7761 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A4JBY8-F1-model_v4 | 8 | 663 | 34 | 678 | 0.5282 |
0.5739 |
| AF-A3MME1-F1-model_v4 | 8 | 663 | 36 | 681 | 0.5272 |
0.5733 |
| AF-A1V1X3-F1-model_v4 | 8 | 663 | 36 | 681 | 0.527 |
0.5728 |
| AF-Q9X6X9-F1-model_v4 | 3 | 663 | 42 | 717 | 0.517 |
0.5649 |