PROTEIN: ShaoY_2019_ERR3405922_bin.6_k141_20667_20
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405922_bin.6_k141_20667_20.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405922_bin.6_k141_20667_20
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Protein Sequence
MKFGTNAISI IGQMREDFEG TVDALHEAGC TFLEPCGDWG ASRELLDICE KQAGKSYWDP 60 ENMEKRLEYM HTVGMTIPGM FVFDQILEEQ ADQMGKYFQK NGIRYAVVNV PGFKDLDAVY 120 DHIALLKQTA EKLRPYHVQL VKHNHEYELQ KVCDRDGKEK YILDIFVEQC TPDELMLEID 180 TGWLVYMGID PVEFIRKRID RIACIHMKDI CSDYKTKDRE AISVACGQGI VDFKAIIDAV 240 PAEKRDQILF MLDQDSSEGD IMEDLFESFK YLYSLCSE 278
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9I6Q0-F1-model_v4 | 1 | 278 | 4 | 270 | 0.7772 |
0.8222 |
| AF-A0A132Z1Z5-F1-model_v4 | 1 | 278 | 5 | 296 | 0.7727 |
0.8145 |
| AF-Q8ZK58-F1-model_v4 | 1 | 278 | 8 | 299 | 0.7704 |
0.8179 |
| AF-A0A0H3GNI5-F1-model_v4 | 1 | 278 | 4 | 270 | 0.7663 |
0.8137 |
| AF-A0A0H3GQY1-F1-model_v4 | 1 | 278 | 3 | 299 | 0.7659 |
0.8111 |
| AF-Q8ZK56-F1-model_v4 | 1 | 278 | 2 | 277 | 0.7561 |
0.7868 |
| AF-P45541-F1-model_v4 | 1 | 278 | 1 | 274 | 0.7507 |
0.7829 |
| AF-A0A0H3GTS6-F1-model_v4 | 1 | 277 | 3 | 307 | 0.7474 |
0.8048 |
| AF-Q8CYS7-F1-model_v4 | 1 | 276 | 2 | 260 | 0.7471 |
0.8006 |
| AF-K0F452-F1-model_v4 | 1 | 278 | 8 | 294 | 0.7461 |
0.7913 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6M5UF15-F1-model_v4 | CBM32 | 1 | 278 | 57 | 320 | 0.6184 |
0.872 |
| AF-A0A1W6DNU1-F1-model_v4 | CBM32 | 1 | 278 | 60 | 323 | 0.6167 |
0.8711 |
| AF-A0A1Y0HRL7-F1-model_v4 | CBM32 | 1 | 278 | 73 | 336 | 0.6112 |
0.8699 |
| AF-Q18607-F1-model_v4 | GH0 | 1 | 277 | 52 | 371 | 0.5555 |
0.6567 |
| A0A4Y8R503 | CBM6 | 1 | 277 | 907 | 1246 | 0.5024 |
0.833 |
| UDF12425.1 | CBM6 | 1 | 275 | 1044 | 1300 | 0.4828 |
0.8958 |
| UDF12423.1 | CBM6 , CBM91 | 1 | 276 | 1347 | 1604 | 0.4694 |
0.8891 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1Y0HRL7 | CBM32 | 1 | 278 | 73 | 336 | 0.6112 |
0.8699 |
| U4KMQ4 | GH20 | 1 | 278 | 59 | 371 | 0.5319 |
0.7228 |
| A0A517P057 | GH33 | 1 | 278 | 410 | 669 | 0.5206 |
0.7906 |
| A0A4Y8R503 | CBM6 | 1 | 277 | 907 | 1246 | 0.5024 |
0.833 |
| UDF12425.1 | CBM6 | 1 | 275 | 1044 | 1300 | 0.4828 |
0.8958 |
| A0A1X9LWB2 | GH3 | 1 | 278 | 3 | 255 | 0.473 |
0.8245 |
| UDF12423.1 | CBM6 , CBM91 | 1 | 276 | 1347 | 1604 | 0.4694 |
0.8891 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3obe-assembly1.cif.gz_A | 1 | 278 | 14 | 285 | 0.8048 |
0.8495 |
| 3obe-assembly2.cif.gz_B | 1 | 278 | 8 | 289 | 0.804 |
0.8367 |
| 3l23-assembly1.cif.gz_A | 1 | 278 | 2 | 282 | 0.7919 |
0.8145 |
| 3dx5-assembly1.cif.gz_A | 1 | 278 | 1 | 274 | 0.7722 |
0.7995 |
| 3lmz-assembly1.cif.gz_A-2 | 1 | 278 | 10 | 250 | 0.7698 |
0.8587 |
| 3p6l-assembly1.cif.gz_A | 1 | 278 | 5 | 260 | 0.7631 |
0.8237 |
| 3cny-assembly2.cif.gz_B | 1 | 278 | 6 | 299 | 0.762 |
0.8089 |
| 8bvk-assembly1.cif.gz_B | 1 | 256 | 4 | 214 | 0.756 |
0.8833 |
| 1i6n-assembly1.cif.gz_A | 1 | 278 | 1 | 277 | 0.7478 |
0.7773 |
| 6wn6-assembly1.cif.gz_A | 1 | 275 | 2 | 263 | 0.747 |
0.7916 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q81RQ4-F1-model_v4 | 1 | 278 | 1 | 277 | 0.7751 |
0.8016 |
| AF-A5YBJ9-F1-model_v4 | 1 | 278 | 3 | 294 | 0.7741 |
0.8179 |
| AF-C1EVJ4-F1-model_v4 | 1 | 278 | 7 | 298 | 0.7723 |
0.8163 |
| AF-B3W8L5-F1-model_v4 | 1 | 278 | 6 | 297 | 0.7721 |
0.8192 |
| AF-Q6HIK1-F1-model_v4 | 1 | 278 | 7 | 298 | 0.772 |
0.8161 |
| AF-C3LHY0-F1-model_v4 | 1 | 278 | 7 | 298 | 0.7719 |
0.8161 |
| AF-B7JPM4-F1-model_v4 | 1 | 278 | 7 | 298 | 0.7719 |
0.816 |
| AF-P42416-F1-model_v4 | 1 | 278 | 6 | 295 | 0.7717 |
0.8145 |
| AF-Q4V1F4-F1-model_v4 | 1 | 278 | 7 | 298 | 0.7715 |
0.8156 |
| AF-Q6HYJ1-F1-model_v4 | 1 | 278 | 7 | 298 | 0.7714 |
0.8156 |