PROTEIN: ShaoY_2019_ERR3405274_bin.1_k141_5546_42
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405274_bin.1_k141_5546_42.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405274_bin.1_k141_5546_42
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Protein Sequence
MAGDKYYIVS DKVIPEVFKK VLEVKESLLT GKYKDISEAT KNTGISRSTF YKYKDYIFPM 60 AEGINSKKIT LVVLLSHEAG TLSKVLDCIA FNKGNILTIS QDIPINMAAN VTITIDIANI 120 TKDIKHLVNT LRLLQNVISV KVLAME 146
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FXT2-F1-model_v4 | 2 | 146 | 4 | 150 | 0.5391 |
0.6059 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2wve-assembly1.cif.gz_A | 64 | 146 | 50 | 131 | 0.509 |
0.8528 |
| 2caj-assembly1.cif.gz_A-2 | 65 | 146 | 49 | 128 | 0.5051 |
0.8564 |
| 2wvc-assembly1.cif.gz_A | 65 | 146 | 52 | 132 | 0.4951 |
0.8398 |
| 2wvf-assembly1.cif.gz_A | 65 | 146 | 54 | 134 | 0.4767 |
0.8103 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B3WD44-F1-model_v4 | 3 | 146 | 1 | 144 | 0.8836 |
0.9211 |
| AF-Q03AD2-F1-model_v4 | 3 | 146 | 1 | 144 | 0.8404 |
0.8849 |
| AF-A9KIT8-F1-model_v4 | 1 | 146 | 1 | 146 | 0.8259 |
0.8674 |
| AF-A7GHM5-F1-model_v4 | 4 | 146 | 1 | 145 | 0.8136 |
0.8652 |
| AF-B1KZT7-F1-model_v4 | 4 | 146 | 1 | 145 | 0.8007 |
0.8539 |
| AF-A0PZF8-F1-model_v4 | 4 | 146 | 1 | 144 | 0.8003 |
0.8542 |
| AF-A5I689-F1-model_v4 | 3 | 146 | 1 | 145 | 0.7891 |
0.8364 |
| AF-A7FXW9-F1-model_v4 | 5 | 146 | 1 | 145 | 0.7843 |
0.8381 |
| AF-Q0TQI3-F1-model_v4 | 3 | 146 | 2 | 145 | 0.7575 |
0.8179 |
| AF-B1IM08-F1-model_v4 | 3 | 146 | 1 | 145 | 0.7482 |
0.7975 |