PROTEIN: ShaoY_2019_ERR3405274_bin.1_k141_4388_32
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405274_bin.1_k141_4388_32.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405274_bin.1_k141_4388_32
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Protein Sequence
MKKIENFLEM IVALTLILDC NSIWAKQIMP KGNSLLFYVS IFLLFIIVVK DILKDKYILL 60 KNKKLFLRTA LTIVIIDLIS FIFILFNNFN SGSFVLKFIL LFNLFVILLV TKSISGNLND 120 LLIKISNIIC FFALISLILY FLGFVLKIIS PNLQVLLNWG DERYVNSYYN LLYETQYFSI 180 FGMRLVRNTG IFTEAPMYAF LLIIALTVQL FFYEVKPNKT KISILVITTI TTFSTIGIGS 240 LSLLIILYFL NQMKTGDYKK ILKNKVVIFI MACSFILSAA FIYQKIEASR DKMGSYSIRM 300 DDFKVGIEVW KKNKIFGAGY ENYDFFKQHV DKSLRGTDIG GSSGIMHIMM HGGIWLLMLN 360 VVPYLLCIYV SFKNKDNKNI IICLLFLGLL LVTAVQYTFI TIYLLARALS VFLIDYKKEE 420 GLLYEKV 427
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G288-F1-model_v4 | 1 | 424 | 6 | 412 | 0.7249 |
0.7671 |
| AF-Q2G1J9-F1-model_v4 | 2 | 425 | 1 | 388 | 0.6738 |
0.729 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 1 | 427 | 3 | 579 | 0.571 |
0.7057 |
| AF-A0A212QE91-F1-model_v4 | GT2 | 1 | 427 | 3 | 579 | 0.5689 |
0.7031 |
| AF-A0A4V0YNK7-F1-model_v4 | GT25 | 1 | 427 | 265 | 694 | 0.5632 |
0.7053 |
| UII34295.1 | GT4 | 1 | 427 | 14 | 782 | 0.5543 |
0.7226 |
| AF-D5MJ04-F1-model_v4 | GT9 | 1 | 427 | 24 | 503 | 0.5362 |
0.6968 |
| AF-D9S8K7-F1-model_v4 | GT4 | 1 | 426 | 11 | 590 | 0.5283 |
0.6921 |
| AF-A0A5B7R2V6-F1-model_v4 | GH5_39 | 1 | 411 | 381 | 782 | 0.4625 |
0.6416 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QSP96058.1 | GT2 | 1 | 427 | 9 | 583 | 0.5747 |
0.7122 |
| H8L3P3 | GT2 | 1 | 427 | 13 | 672 | 0.5634 |
0.723 |
| A0A517MXC4 | GT26 | 1 | 427 | 18 | 453 | 0.5559 |
0.7154 |
| UII34295.1 | GT4 | 1 | 427 | 14 | 782 | 0.5543 |
0.7226 |
| WBY01952.1 | GT9 | 1 | 427 | 14 | 555 | 0.5445 |
0.7058 |
| B8IGI7 | GH16_7 | 1 | 427 | 16 | 464 | 0.5362 |
0.7165 |
| D5MJ04 | GT9 | 1 | 427 | 24 | 503 | 0.5362 |
0.6968 |
| A0A9Q9IL13 | GT4 | 1 | 427 | 17 | 507 | 0.5315 |
0.7343 |
| A0A8E2X9M6 | GT2 | 1 | 422 | 5 | 513 | 0.5306 |
0.7324 |
| D9S8K7 | GT4 | 1 | 426 | 11 | 590 | 0.5283 |
0.6921 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6F7F9-F1-model_v4 | 1 | 421 | 8 | 407 | 0.6341 |
0.7698 |