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PROTEIN: ShaoY_2019_ERR3405274_bin.1_k141_2423_15

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Protein File & Metadata
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Source:
ShaoY_2019_ERR3405274_bin.1_k141_2423_15.pdb
Genome ID:
ShaoY_2019_ERR3405274_bin.1
Protein ID:
ShaoY_2019_ERR3405274_bin.1_k141_2423_15

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKRKKLLSTV   LLGIMSMSLV   ACGSNGDKDT   GEATPADNEA   TITVQVEKEW   VPYYNQVKER 60
VLKEYPKATI   NFNEVGSFEH   LDALDKTDAT   NPDIADVFAL   PADRLYGLAN   NNVLAPIDAK 120
AMAEKVGGFK   DFDGGLGGNF   KVGDDYLAFP   YNIETLIAYV   NKENAAAANI   DTSKDIEFTS 180
LDFGKMLVSA   HDAWFGVAFA   NSANFEFLDK   ADDGTLTTDG   TKAWADLSAE   QKGLFEALYN 240
YWKPHYENNT   DLWDKDAVSG   YLDAQFSAAN   GAAIRIDGPW   ATTGLQDKVG   ADNLEVVPLS 300
QITVNGKPLN   QWKGGWGLGI   NARVEEDADQ   MALAESFIME   VVNPTYAKDL   FNSTGKILEN 360
VEASAYDGIG   GMNEKVIKAT   YASYEGAVNR   PLFIEYGKVW   DTWQNALLSW   SGQKPANAEE 420
AYKQVQASFE   AMMGSY 436
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CKQ7-F1-model_v4 37 436 37 416 0.7685 0.8743
AF-P59214-F1-model_v4 26 436 30 418 0.7655 0.8573
AF-K0F002-F1-model_v4 1 436 33 439 0.7587 0.8298
AF-A0A133CPC5-F1-model_v4 34 436 30 422 0.7526 0.8358
AF-A0A0H3GKJ8-F1-model_v4 27 436 17 403 0.7463 0.8312
AF-P76042-F1-model_v4 31 436 22 428 0.7398 0.8054
AF-A0A132ZDH4-F1-model_v4 34 435 27 427 0.7319 0.8028
AF-P19576-F1-model_v4 40 436 30 396 0.7284 0.8357
AF-A0A0H3GKX2-F1-model_v4 40 436 30 396 0.7281 0.8355
AF-Q2G1E9-F1-model_v4 1 436 24 411 0.7275 0.8205
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K8EJG7-F1-model_v4 CBM50 , CE4 37 436 33 412 0.766 0.8699
A0A0M1Q963 GH43_11 30 436 37 489 0.6646 0.7774
A0A9Q8PNJ5 GH4 36 436 468 864 0.5695 0.8308
AF-A0A7U1BNH7-F1-model_v4 GH10 36 436 27 418 0.5602 0.7838
AF-A0A1Q2TKJ3-F1-model_v4 GH49 1 436 275 795 0.5467 0.7121
A0A242CSU4 CBM35 36 436 573 966 0.5078 0.7791
UJP10085.1 GH154 1 414 328 1167 0.4288 0.6913
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K8EJG7 CBM50 , CE4 37 436 33 412 0.766 0.8699
A0A0M1Q963 GH43_11 30 436 37 489 0.6646 0.7774
K8E205 GH32 38 416 34 344 0.6552 0.8186
A0A9Q8PNJ5 GH4 36 436 468 864 0.5695 0.8308
A0A7U1BNH7 GH10 36 436 27 418 0.5602 0.7838
A0A1Q2TKJ3 GH49 1 436 275 795 0.5467 0.7121
A0A242CSU4 CBM35 36 436 573 966 0.5078 0.7791
UJP10085.1 GH154 1 414 328 1167 0.4288 0.6913
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4uac-assembly1.cif.gz_A 38 436 1 383 0.7847 0.8512
2xd3-assembly1.cif.gz_A 41 436 1 375 0.7839 0.8581
5mkb-assembly1.cif.gz_A 34 436 1 373 0.7828 0.8599
5tu0-assembly1.cif.gz_A 37 436 1 380 0.7794 0.8541
7xmn-assembly1.cif.gz_A-2 39 436 1 367 0.778 0.8594
3jzj-assembly1.cif.gz_A 36 436 1 385 0.7722 0.8394
5f7v-assembly1.cif.gz_A 38 436 1 386 0.7637 0.8296
1urs-assembly1.cif.gz_A 40 435 1 366 0.7629 0.8465
1mdp-assembly2.cif.gz_2 40 436 4 363 0.7625 0.854
8art-assembly2.cif.gz_B 37 436 1 389 0.7621 0.8265
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O07009-F1-model_v4 24 436 23 415 0.7849 0.8686
AF-O06989-F1-model_v4 37 436 33 412 0.768 0.8718
AF-P59214-F1-model_v4 26 436 30 418 0.7655 0.8573
AF-P59213-F1-model_v4 26 436 30 418 0.759 0.8506
AF-Q8FVS7-F1-model_v4 37 436 23 410 0.7496 0.8329
AF-Q578M8-F1-model_v4 37 436 23 410 0.7492 0.8326
AF-Q2YKZ9-F1-model_v4 37 436 23 410 0.7472 0.8305
AF-Q9K491-F1-model_v4 24 436 22 422 0.7408 0.8124
AF-P76042-F1-model_v4 31 436 22 428 0.7398 0.8054
AF-Q53684-F1-model_v4 30 436 21 420 0.732 0.824
Download Full SwissProt Results