PROTEIN: ShaoY_2019_ERR3404980_bin.1_k141_1545_229
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Protein File & Metadata
Source:
ShaoY_2019_ERR3404980_bin.1_k141_1545_229.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3404980_bin.1_k141_1545_229
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Protein Sequence
MHVFNSRADF DAQMKSVKKW MRTGQALDGV ADLQHDVAYS IGDSLVYWWV NAHEAATADL 60 VGHRRYHAVL APLDGDLTVE VAPKAGLTCT RAYSDIDDRE RFEGAGEAVT IPAGGVAVVE 120 IDEAYRVVAD AADPRVVVLH VTVEGYSFPN K 151
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AC73-F1-model_v4 | 1 | 145 | 1 | 143 | 0.9005 |
0.9626 |
| AF-Q8CYF8-F1-model_v4 | 1 | 144 | 1 | 150 | 0.8095 |
0.8758 |
| AF-P45424-F1-model_v4 | 1 | 147 | 1 | 154 | 0.806 |
0.868 |
| AF-Q32BB8-F1-model_v4 | 1 | 147 | 1 | 154 | 0.8042 |
0.8664 |
| AF-Q8ZLQ9-F1-model_v4 | 1 | 147 | 1 | 154 | 0.801 |
0.8657 |
| AF-O25673-F1-model_v4 | 1 | 150 | 2 | 178 | 0.7953 |
0.891 |
| AF-Q8ZL82-F1-model_v4 | 1 | 146 | 1 | 154 | 0.7899 |
0.8577 |
| AF-P37673-F1-model_v4 | 1 | 147 | 1 | 155 | 0.7866 |
0.852 |
| AF-Q8DNV1-F1-model_v4 | 1 | 144 | 1 | 150 | 0.7824 |
0.8504 |
| AF-P44583-F1-model_v4 | 1 | 146 | 1 | 155 | 0.7738 |
0.8458 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4tsd-assembly1.cif.gz_A | 1 | 150 | 1 | 177 | 0.7869 |
0.8846 |
| 1s4c-assembly1.cif.gz_A | 1 | 146 | 1 | 150 | 0.7776 |
0.8382 |
| 1s4c-assembly1.cif.gz_D | 1 | 146 | 1 | 140 | 0.7736 |
0.8387 |
| 1s4c-assembly2.cif.gz_B | 1 | 146 | 1 | 155 | 0.7718 |
0.8441 |
| 1s4c-assembly2.cif.gz_C | 1 | 146 | 1 | 147 | 0.7702 |
0.822 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AC74-F1-model_v4 | 1 | 145 | 1 | 143 | 0.9007 |
0.9628 |
| AF-P0AC73-F1-model_v4 | 1 | 145 | 1 | 143 | 0.9005 |
0.9626 |
| AF-P45424-F1-model_v4 | 1 | 147 | 1 | 154 | 0.806 |
0.868 |
| AF-P37673-F1-model_v4 | 1 | 147 | 1 | 155 | 0.7866 |
0.852 |
| AF-P44583-F1-model_v4 | 1 | 146 | 1 | 155 | 0.7738 |
0.8458 |