PROTEIN: ShaoY_2019_ERR3404906_bin.6_k141_2726_25
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Protein File & Metadata
Source:
ShaoY_2019_ERR3404906_bin.6_k141_2726_25.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3404906_bin.6_k141_2726_25
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Protein Sequence
MFKGKNLYLF NESSNVIWNF VSRENSCILC RNFKEDEWSS YEVIAKNCSP KFYLTALPND 60 IIYIFYKDLN GNLLFKVNNK LKWSKELLLQ KNINGAYTIK FKIIPLDGEV NIIYALFNKA 120 TNKTILLHQK LHENYKLSNI KLIDTMDGYH NTPINIYITK DKELRILYQK FNDFYKLGYK 180 TFNLTTDSWS SFNLVAKDDK PFINYNFLLL SNNRNVDVDD SSNSNLHEKI YSYTKLINQK 240 DKIIYDLNAS LNIEKKNSLS YRLKLEKIDE SLKRFNENKE LIQECIEYLQ ENLSIKNEEN 300 LKLKELSLQD TIKIANLTKE VLSLKETLNN KDSRLSELLS TLISRI 346
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6I6MRI6-F1-model_v4 | GH30_5 | 3 | 264 | 508 | 817 | 0.3657 |
0.6588 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| APR80663.1 | GH25 | 1 | 255 | 290 | 574 | 0.4059 |
0.6733 |
| A0A6I6MRI6 | GH30_5 | 3 | 264 | 508 | 817 | 0.3657 |
0.6588 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.