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PROTEIN: Rep_555_c_4_55

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Protein File & Metadata
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Source:
Rep_555_c_4_55.pdb
Genome ID:
Rep_555
Protein ID:
Rep_555_c_4_55

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Detailed structural information will appear here after analysis...

Protein Sequence 
MEAYFYFGGE   LPGKRAYHSC   ICLAEGLTDL   GVACYSDFAN   YLPGIGKDFL   MKYDDHHHIQ 60
DADIIIIHYT   LYERDVRADE   TLIRLNRLPR   KYITVFLDDS   DGLRTPGFRK   GAQNCDYVLK 120
SHYNRLYEYP   DNFRPWQFGV   SNRILNAVSP   LPYSERIPQI   LVNFRAKHQL   RDYMGELIRP 180
VFSKYMNWNA   ECDTFTSDTL   EGDDLLFWEQ   TGARHYPEYY   KKLSSSMVCA   CYGGVFAIPI 240
GNYNKYTAKI   ARVVNNVFHI   YEWDRVRQWD   SWRLWEAWAA   ASCVIHIDLD   KYGCILPVMP 300
ENGKHYIGVD   IKNIDKLESL   LAMDSKRSGE   SSLLGDIAAN   GREFVLENYT   PRKVAERLLN 360
LIEF 364
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9HUG4-F1-model_v4 1 364 1 298 0.669 0.7772
AF-P27126-F1-model_v4 1 364 1 310 0.6091 0.6821
AF-Q9HZ80-F1-model_v4 1 364 1 409 0.6049 0.6631
AF-P71243-F1-model_v4 1 364 1 405 0.6043 0.6589
AF-P26388-F1-model_v4 1 364 1 405 0.6042 0.6587
AF-X8FJ59-F1-model_v4 1 364 1 365 0.6029 0.6396
AF-P9WMY5-F1-model_v4 1 364 3 368 0.6006 0.6344
AF-Q59LF2-F1-model_v4 1 364 8 443 0.5947 0.6688
AF-Q8DRG8-F1-model_v4 1 364 26 396 0.5741 0.6277
AF-K7LKE4-F1-model_v4 1 364 86 480 0.5714 0.666
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-F4BT06-F1-model_v4 GT4 1 364 1 364 0.6519 0.6767
AF-A0A250IFZ1-F1-model_v4 GT4 1 364 1 329 0.6497 0.7105
AF-A0A6G7LQM9-F1-model_v4 GT4 1 362 2 341 0.6408 0.6859
AF-A0A1B1TPG6-F1-model_v4 GT4 1 364 1 379 0.6408 0.6828
AF-Q2STR7-F1-model_v4 GT4 1 364 1 338 0.6407 0.6982
AF-A0A248VIB7-F1-model_v4 GT4 1 364 1 338 0.6398 0.6973
AF-A0A808WCX1-F1-model_v4 GT4 1 364 1 338 0.6393 0.697
AF-F2LAX6-F1-model_v4 GT4 1 364 1 338 0.639 0.6968
AF-A0A095YHC3-F1-model_v4 GT4 1 364 1 338 0.6389 0.6967
AF-C5ADC1-F1-model_v4 GT4 1 364 1 338 0.6388 0.6968
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0S2I0L4 GT4 1 364 1 384 0.6687 0.7081
A7HUE6 GT4 1 364 1 342 0.6558 0.7013
BDU20400.1 GT4 1 364 1 351 0.6512 0.6905
WET02065.1 GT4 1 364 1 366 0.6442 0.6716
A0A385JP14 GT4 1 364 1 343 0.6422 0.6861
A0A6G7LQM9 GT4 1 362 2 341 0.6408 0.6859
A0A2D3UHB0 GT4 1 364 6 370 0.64 0.6745
A0A9E8ENU7 GT4 1 364 6 392 0.6394 0.6836
A0A6H1ZQ58 GT4 1 364 4 350 0.6389 0.6821
A0A516GS17 GT4 1 364 1 357 0.6377 0.6708
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
1ya6-assembly1.cif.gz_A 1 364 2 380 0.627 0.6674
1y8z-assembly1.cif.gz_A 1 364 2 391 0.6268 0.6745
1ya6-assembly2.cif.gz_B 1 364 4 377 0.624 0.6614
1y6f-assembly2.cif.gz_B 1 364 3 394 0.6227 0.6721
1y6f-assembly1.cif.gz_A 1 364 4 394 0.6197 0.6691
3oka-assembly1.cif.gz_A 1 364 1 375 0.6192 0.6555
1xv5-assembly1.cif.gz_A 1 364 2 401 0.6185 0.6723
1y8z-assembly1.cif.gz_B 1 364 3 373 0.6174 0.6522
7qsg-assembly2.cif.gz_B 1 364 2 302 0.6149 0.6973
6ejj-assembly1.cif.gz_A 1 364 2 356 0.5775 0.6165
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P42090-F1-model_v4 1 364 1 315 0.6615 0.7329
AF-Q4JAK2-F1-model_v4 1 364 2 350 0.6325 0.673
AF-Q9R9N1-F1-model_v4 1 364 1 338 0.6325 0.6788
AF-A0QRG8-F1-model_v4 1 364 1 371 0.6103 0.6421
AF-P27126-F1-model_v4 1 364 1 310 0.6091 0.6821
AF-P71243-F1-model_v4 1 364 1 405 0.6043 0.6589
AF-P9WMY4-F1-model_v4 1 364 3 368 0.6043 0.6384
AF-P26388-F1-model_v4 1 364 1 405 0.6042 0.6587
AF-P9WMY5-F1-model_v4 1 364 3 368 0.6006 0.6344
AF-Q59LF2-F1-model_v4 1 364 8 443 0.5947 0.6688
Download Full SwissProt Results