PROTEIN: Rep_555_c_15_51
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Protein File & Metadata
Source:
Rep_555_c_15_51.pdb
Genome ID:
Protein ID:
Rep_555_c_15_51
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Protein Sequence
MKKFQLFACA FAAVLFSLSF NACSDDDPEI DPEKPENPEE PEEPETPAST THFDLWVTVG 60 ATGGMGSTDA VLVKSVDSLT EQPTIDFKND GVDVTATIKE ETIYKGKYYY QVPVSADRFA 120 KYQIVGNKLE TVAQQIFVKN VFKDRRYTHA WIDDNTLVIM AANGAADKVI WTKLNATDMS 180 ILGEGELALE APQGDKFSTS GLAKYRKSDD KIIYFYQHKK ETKNFYAAFI NAKDMTVEKE 240 VKEDRAEMMA GTAYGELLQD KMFFDENENL YLACNNVIEG APSTTQQYGR LLRIKKGDLD 300 FDKSYLGHDY SKGKIITASY LTTGKALLYI MDPDYTGATG WGAAYNCYYA TLDLTTDERT 360 EFQYEGKHLP FSSGNFSQRS LVDGDKAYIG VNPETTKPCI YIYDIKTGEM TKGLTIAEGY 420 GFDRITLMDN ADAK 434
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-I1L7P6-F1-model_v4 | 58 | 427 | 48 | 354 | 0.5282 |
0.6752 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0J9D3S2-F1-model_v4 | PL42 | 49 | 431 | 62 | 470 | 0.5628 |
0.6742 |
| AF-A0A517NJS7-F1-model_v4 | GH33 | 60 | 433 | 17 | 380 | 0.5281 |
0.6051 |
| AF-A0A516Q0W7-F1-model_v4 | GH33 | 47 | 433 | 52 | 418 | 0.5194 |
0.6154 |
| AF-A0A291ET04-F1-model_v4 | GH74 | 1 | 423 | 1 | 493 | 0.4519 |
0.6034 |
| AF-A0A7I7QS08-F1-model_v4 | GH16_3 | 40 | 432 | 95 | 406 | 0.4401 |
0.7248 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5Q3QBN1 | GH184 | 9 | 422 | 3 | 524 | 0.5647 |
0.6579 |
| A0A075GCZ0 | GH33 | 53 | 428 | 29 | 366 | 0.5353 |
0.6446 |
| A0A517NJS7 | GH33 | 60 | 433 | 17 | 380 | 0.5281 |
0.6051 |
| A0A250JJ36 | CBM57 | 14 | 433 | 47 | 590 | 0.5263 |
0.6364 |
| A9GHE9 | PL42 | 1 | 433 | 112 | 599 | 0.5239 |
0.6204 |
| A0A516Q0W7 | GH33 | 47 | 433 | 52 | 418 | 0.5194 |
0.6154 |
| A0A2D2CY61 | PL42 | 8 | 434 | 82 | 513 | 0.5 |
0.5658 |
| K9PHR3 | GH74 | 7 | 423 | 43 | 745 | 0.4589 |
0.6108 |
| A0A7I7QS08 | GH16_3 | 40 | 432 | 95 | 406 | 0.4401 |
0.7248 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8okv-assembly4.cif.gz_D | 48 | 429 | 1 | 322 | 0.6713 |
0.788 |
| 4qrj-assembly2.cif.gz_B | 49 | 428 | 1 | 343 | 0.6455 |
0.7403 |
| 2gop-assembly1.cif.gz_A | 50 | 420 | 15 | 315 | 0.5954 |
0.7386 |
| 7on7-assembly2.cif.gz_B | 51 | 428 | 1 | 272 | 0.5853 |
0.7354 |
| 7cqy-assembly1.cif.gz_A | 2 | 430 | 5 | 405 | 0.5649 |
0.6237 |
| 6l8a-assembly1.cif.gz_C | 2 | 430 | 5 | 408 | 0.5471 |
0.6027 |
| 6l8a-assembly2.cif.gz_D | 45 | 434 | 50 | 438 | 0.5226 |
0.6081 |
| 8blw-assembly1.cif.gz_B | 48 | 433 | 21 | 353 | 0.5196 |
0.7867 |
| 1yr2-assembly1.cif.gz_A | 49 | 422 | 80 | 457 | 0.4734 |
0.6661 |
| 6l6r-assembly1.cif.gz_A | 16 | 430 | 84 | 565 | 0.4096 |
0.5065 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.