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PROTEIN: Rep_500_c_266_12

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Protein File & Metadata
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Source:
Rep_500_c_266_12.pdb
Genome ID:
Rep_500
Protein ID:
Rep_500_c_266_12

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Detailed structural information will appear here after analysis...

Protein Sequence 
MRKVFVSMVL   AVLALGSQAQ   VLKNDLLKGY   KVGDTLEKTV   YDDKRAPINV   DTWCGGFTAK 60
PVEGVVSPTV   GKALSYAGYN   EAGLSINFGF   PQGVKGSRVS   VYSLVESGKV   YSKGTYYLAC 120
LVNFAKVGSS   NLADFLAASA   SYVGGGNRGQ   VYVRREGNDK   IKFAVGLLKE   RNETPMVYDY 180
NTTHLLVLKV   DYDKNEVSLF   VDPELSQNEP   KADAVVVGEE   GALKAGLKAI   SFRNRSGFKG 240
NIGSFRFAKD   WAGAVGK 257
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q4CKC3-F1-model_v4 17 257 20 229 0.5802 0.7396
AF-Q4D2E7-F1-model_v4 17 257 22 225 0.5801 0.767
AF-Q4CL57-F1-model_v4 16 257 82 293 0.5268 0.7418
AF-Q8IBM1-F1-model_v4 1 257 20 267 0.5141 0.6336
AF-I1LML9-F1-model_v4 40 250 42 258 0.4422 0.6254
AF-Q4CLC2-F1-model_v4 17 255 387 594 0.4293 0.7365
AF-Q4CRD5-F1-model_v4 16 257 486 694 0.4249 0.7565
AF-Q4E026-F1-model_v4 16 257 479 688 0.4236 0.7549
AF-Q4DUG3-F1-model_v4 16 257 488 696 0.4231 0.7608
AF-Q4E1F0-F1-model_v4 16 257 485 694 0.4229 0.7567
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K3VJI1 PL20 1 257 3 257 0.6448 0.6905
AF-A0A2H4FY15-F1-model_v4 GH33 17 257 8 215 0.6229 0.7592
AF-B6F143-F1-model_v4 PL20 1 257 3 258 0.6141 0.6466
AF-A0A7S8E4S6-F1-model_v4 PL20 3 257 5 262 0.6127 0.6572
A0A8G0PHE2 PL20 15 257 45 287 0.581 0.6668
AF-A0A4P7NPE2-F1-model_v4 GH131 6 256 94 367 0.5725 0.7059
AF-A0A3G6SB70-F1-model_v4 PL7 24 249 27 232 0.5449 0.6614
AF-R4LX68-F1-model_v4 PL7_4 25 250 28 258 0.5388 0.6326
WBQ08344.1 CBM32 17 257 32 280 0.5073 0.683
AF-R9TNP5-F1-model_v4 GH33 16 257 126 326 0.5067 0.778
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K3VJI1 PL20 1 257 3 257 0.6448 0.6905
A0A0S1MIR9 GH131 2 257 7 306 0.6218 0.7096
A0A180G7A5 GH131 6 257 15 302 0.6145 0.7173
A0A4P7N6T6 PL20 1 257 4 256 0.6134 0.672
A0A1H1YDB2 GH16 9 250 7 253 0.598 0.6595
A0A0C4EPG6 GH131 15 257 43 321 0.587 0.7158
A0A8G0PHE2 PL20 15 257 45 287 0.581 0.6668
A0A5B8SWH3 PL14_3 17 250 54 306 0.5801 0.7084
WJH38088.1 GH16_7 17 252 38 270 0.5799 0.677
A9HDH8 GH16_7 16 257 35 281 0.5763 0.6648
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3o0x-assembly2.cif.gz_B 18 257 1 227 0.6343 0.7284
5lk5-assembly1.cif.gz_E 19 257 1 225 0.633 0.732
8tzr-assembly1.cif.gz_C 17 257 1 238 0.6096 0.6979
5hcf-assembly1.cif.gz_A 20 257 1 239 0.6056 0.6801
5hcf-assembly5.cif.gz_E 20 257 1 239 0.6053 0.6814
5ly8-assembly1.cif.gz_A 15 251 2 226 0.6051 0.6776
1qnw-assembly1.cif.gz_A 18 250 1 233 0.5754 0.6306
3v0b-assembly1.cif.gz_B 6 257 536 988 0.3617 0.61
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9P7D0-F1-model_v4 18 257 28 287 0.535 0.6931
AF-O81291-F1-model_v4 20 257 25 271 0.4179 0.6531
AF-P18269-F1-model_v4 16 257 466 683 0.4058 0.7077
AF-A0A069CUU9-F1-model_v4 11 257 897 1131 0.3694 0.6793
AF-P46082-F1-model_v4 7 257 544 996 0.3619 0.6137
AF-Q45914-F1-model_v4 6 257 580 1032 0.3616 0.6135
AF-Q06366-F1-model_v4 6 257 565 992 0.3086 0.5212
Download Full SwissProt Results