PROTEIN: Rep_456_c_19_24
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Protein File & Metadata
Source:
Rep_456_c_19_24.pdb
Genome ID:
Protein ID:
Rep_456_c_19_24
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Protein Sequence
MSNIKFRLAK PSDAKQIANV HWNVRERYQK GIFLSLGKSF LRSYYKVILN DPYEVVVCAE 60 NSQRKIIGFS SATLDAKYQA LTIKKNIVRL GFSALGSLIF HPRLIIEVID RYKSLDKKNK 120 IKFIHNEGVR GEYWCWLKNE DDGVKSIEMG HVKENIIYNL GYRELFFEVD KFNKRVYKFY 180 TKIDKSEVVE EIVLPDGRER VLFKKQLKSD NGLVL 215
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58QH5-F1-model_v4 | 1 | 207 | 1 | 165 | 0.7208 |
0.836 |
| AF-Q2G1V1-F1-model_v4 | 1 | 208 | 1 | 164 | 0.7203 |
0.8712 |
| AF-Q2FVQ1-F1-model_v4 | 1 | 207 | 1 | 171 | 0.7188 |
0.8227 |
| AF-A0A1C1C8V7-F1-model_v4 | 2 | 212 | 1 | 227 | 0.7172 |
0.779 |
| AF-A0A0H3GSP7-F1-model_v4 | 1 | 208 | 2 | 176 | 0.7118 |
0.8074 |
| AF-U7PS04-F1-model_v4 | 1 | 214 | 10 | 235 | 0.7061 |
0.7721 |
| AF-A0A0K0DV28-F1-model_v4 | 3 | 211 | 1 | 155 | 0.7046 |
0.853 |
| AF-C0NQ27-F1-model_v4 | 1 | 215 | 1 | 222 | 0.703 |
0.7449 |
| AF-C1H3J9-F1-model_v4 | 1 | 211 | 1 | 210 | 0.7017 |
0.748 |
| AF-Q8DQT7-F1-model_v4 | 5 | 208 | 1 | 169 | 0.6993 |
0.8063 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A143BLY6-F1-model_v4 | GT4 | 1 | 215 | 396 | 618 | 0.5631 |
0.8493 |
| AF-A0A3G6IXE3-F1-model_v4 | GT4 | 1 | 212 | 429 | 636 | 0.5597 |
0.8738 |
| AF-A0A0D5X2Y8-F1-model_v4 | GH84 | 1 | 208 | 517 | 723 | 0.471 |
0.7623 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A143BLY6 | GT4 | 1 | 215 | 396 | 618 | 0.5631 |
0.8493 |
| A0A3G6IXE3 | GT4 | 1 | 212 | 429 | 636 | 0.5597 |
0.8738 |
| A2QGE5 | GT25 | 2 | 210 | 1 | 250 | 0.4897 |
0.776 |
| A0A0D5X2Y8 | GH84 | 1 | 208 | 517 | 723 | 0.471 |
0.7623 |
| UJR24030.1 | GH84 | 1 | 207 | 544 | 742 | 0.4406 |
0.7428 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4bmh-assembly1.cif.gz_A | 2 | 209 | 1 | 202 | 0.7386 |
0.7922 |
| 1wk4-assembly1.cif.gz_A | 4 | 210 | 1 | 174 | 0.7283 |
0.8245 |
| 1tiq-assembly1.cif.gz_A | 3 | 208 | 1 | 171 | 0.7112 |
0.8193 |
| 1tiq-assembly2.cif.gz_B | 3 | 208 | 1 | 163 | 0.7019 |
0.8339 |
| 8osp-assembly2.cif.gz_C | 1 | 207 | 3 | 174 | 0.6994 |
0.8057 |
| 3fnc-assembly1.cif.gz_B | 1 | 207 | 1 | 161 | 0.6886 |
0.8106 |
| 5icw-assembly3.cif.gz_D | 1 | 208 | 4 | 175 | 0.6748 |
0.7795 |
| 4xnh-assembly1.cif.gz_C | 2 | 208 | 2 | 159 | 0.6682 |
0.7962 |
| 5gi6-assembly1.cif.gz_A | 1 | 207 | 1 | 202 | 0.6611 |
0.7132 |
| 4fd4-assembly2.cif.gz_B | 3 | 207 | 1 | 212 | 0.6608 |
0.7176 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O32075-F1-model_v4 | 3 | 215 | 1 | 173 | 0.7129 |
0.8111 |
| AF-P46543-F1-model_v4 | 1 | 208 | 1 | 173 | 0.712 |
0.8125 |
| AF-P21340-F1-model_v4 | 1 | 208 | 1 | 172 | 0.7105 |
0.8125 |
| AF-O34350-F1-model_v4 | 1 | 209 | 1 | 164 | 0.704 |
0.8521 |
| AF-O14195-F1-model_v4 | 1 | 212 | 7 | 232 | 0.6842 |
0.7533 |
| AF-Q9USH6-F1-model_v4 | 1 | 212 | 33 | 204 | 0.6139 |
0.7619 |
| AF-Q55DK2-F1-model_v4 | 1 | 212 | 498 | 737 | 0.4806 |
0.7642 |
| AF-Q9UZ78-F1-model_v4 | 1 | 208 | 469 | 664 | 0.3815 |
0.6648 |