PROTEIN: Rep_456_c_13_7
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Protein File & Metadata
Source:
Rep_456_c_13_7.pdb
Genome ID:
Protein ID:
Rep_456_c_13_7
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Detailed structural information will appear here after analysis...
Protein Sequence
MKLPIANYWI LYCLLYSISF LSVPTWAQTK MPYILDMVHN NPGEKPYITK YNNPEFLKEQ 60 GFTGAVTHWY INCAITYDNY KKGVIKNKAE REWIEHRAND IEHKITTFHK AGIAVYPFTD 120 FIVFPQSIWE KYGKEITGKG NVTGTGGSDE RARKPNLHNK RTQELLIAQI DGIFKRFPSL 180 DGLTLRFGET YLHDTPFHLG GSPVRNGEIG IEDHILLLNI LREEICVKRN KKLFYRTWDF 240 GYNFHTNPQY YLAVTNQIEP HPNLIFSIKY QQDDYHRMTP FNPTLGIGKH QQIVESQSRM 300 EAYGKGAHPY YTAKGVIEGW PETKYEILFG EHRFTGKKNS PELPRGIKDI LSTDRLQGIM 360 TWSNGGGWQG PYITHEIWTD LNTYIVSHWA QNTRATEEEL FYQFTDSLKL DLFNADIFRQ 420 IAILSIEGVR KGHCNSYTRN DVWWTRDEFF SAVANVDIIR NILKKGLQEK VLAEKTEATA 480 IWLQIEALSK QLTCIDKDLQ EAIKVSCTYG RIKYQLIEQM WKIMIVEGKY QQNIPFNTQE 540 VNEIIDKYDS LWKEWKLLKE SSPWCATLYT DMAFRNQKKG SIGELVKTWK ERIYNN 596
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-F1R042-F1-model_v4 | 29 | 566 | 95 | 468 | 0.5118 |
0.7129 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WDE98913.1 | GH0 | 26 | 584 | 107 | 709 | 0.6778 |
0.7958 |
| AF-A0A5S9IR15-F1-model_v4 | GH0 | 24 | 596 | 42 | 622 | 0.6737 |
0.823 |
| QRN95889.1 | GH0 | 24 | 596 | 50 | 633 | 0.658 |
0.8187 |
| AF-A0A5Q0GW34-F1-model_v4 | GH0 | 26 | 596 | 161 | 735 | 0.6328 |
0.82 |
| AF-A0A7L6BEL5-F1-model_v4 | GH0 | 15 | 596 | 67 | 732 | 0.6314 |
0.8131 |
| AF-A0A4P7DUL1-F1-model_v4 | GH20 | 8 | 595 | 5 | 513 | 0.63 |
0.7018 |
| AF-A0A1C4YQM2-F1-model_v4 | GH0 | 26 | 596 | 168 | 751 | 0.627 |
0.8252 |
| AF-A0A516GUL3-F1-model_v4 | GH20 | 11 | 594 | 17 | 520 | 0.627 |
0.7065 |
| AF-A0A7R7DPC5-F1-model_v4 | GH0 | 26 | 596 | 139 | 718 | 0.6268 |
0.8181 |
| AF-A0A1A8ZGE8-F1-model_v4 | GH0 | 26 | 596 | 165 | 748 | 0.6256 |
0.825 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A290Q4E1 | GH138 | 23 | 596 | 57 | 700 | 0.6232 |
0.7119 |
| A0A7G9QBU6 | GH89 | 28 | 585 | 4 | 501 | 0.6226 |
0.6989 |
| A0A5J6SXV5 | GH163 | 26 | 593 | 122 | 619 | 0.6099 |
0.7484 |
| L0G695 | GH20 | 26 | 594 | 44 | 533 | 0.6086 |
0.7095 |
| A0A0F5JE42 | GH20 | 26 | 595 | 36 | 526 | 0.6045 |
0.7004 |
| A0A9P3ZXA4 | GH89 | 28 | 596 | 114 | 676 | 0.5965 |
0.7014 |
| A0A1C7H4W0 | GH89 | 28 | 596 | 115 | 672 | 0.5951 |
0.7058 |
| U5Q568 | GH89 | 28 | 596 | 118 | 680 | 0.5929 |
0.703 |
| A0A3T1DE29 | GH20 | 27 | 596 | 129 | 633 | 0.5817 |
0.7152 |
| A0A6S6QPC4 | GH138 | 21 | 596 | 85 | 728 | 0.5804 |
0.7301 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1h41-assembly1.cif.gz_B | 24 | 587 | 91 | 701 | 0.6041 |
0.6975 |
| 1h41-assembly1.cif.gz_A | 24 | 587 | 91 | 700 | 0.6039 |
0.6968 |
| 1l8n-assembly1.cif.gz_A-2 | 23 | 545 | 81 | 671 | 0.5961 |
0.7232 |
| 6hzf-assembly2.cif.gz_B | 23 | 596 | 43 | 679 | 0.5937 |
0.7285 |
| 1mqr-assembly1.cif.gz_A-2 | 23 | 589 | 82 | 674 | 0.5931 |
0.67 |
| 6hze-assembly2.cif.gz_B | 23 | 596 | 47 | 685 | 0.5926 |
0.7297 |
| 6hze-assembly1.cif.gz_A | 23 | 596 | 49 | 687 | 0.5916 |
0.7295 |
| 1k9d-assembly1.cif.gz_A | 23 | 589 | 80 | 670 | 0.5915 |
0.6662 |
| 6hzf-assembly1.cif.gz_A | 23 | 596 | 50 | 688 | 0.5907 |
0.7287 |
| 5un9-assembly1.cif.gz_B | 31 | 585 | 1 | 426 | 0.5412 |
0.6428 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.