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PROTEIN: Rep_456_c_13_47

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Protein File & Metadata
Download PDB File
Source:
Rep_456_c_13_47.pdb
Genome ID:
Rep_456
Protein ID:
Rep_456_c_13_47

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKNLSIRHGK   SSGNKSVLLL   TVLALGTGFS   SLSAQTNAAS   DQITAQPAAD   RIVPFRLSEQ 60
GVVRPVEWGL   DTAWEDEGNI   RRGQGFMETV   DIVRVSFRPT   DPIVDGDLGA   DQKEHIQTRL 120
GLLGFVSPKP   KLAINSDHPK   IDDSYKGNAQ   AWAQMMDLHT   RYFQDAGYEV   ISVAPFNEPD 180
YSYTGQGTRE   DFYKIAVGLR   ANPRFENIRI   CGGNTLNCDE   ALPWYNYLKE   QLDEGNTHQL 240
AGEFNGYADF   YETVRKDGKM   AMNDEMHNVM   EAMVGLEYGL   QTGIWWGSAE   YARGEFCKIS 300
RGGERLAYTE   HRPNWTAASV   YRSKDGSKVQ   AFGGVSERQA   KTTTYRFVSK   EKDVFYDGYG 360
PQREFYLEMP   GGKSYQDDEQ   RNAERVVNIT   WGEDIQPVID   GQYVLINRST   QRADT 415
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-I1N8L7-F1-model_v4 39 391 18 646 0.4983 0.7071
AF-Q9SG80-F1-model_v4 38 392 29 658 0.489 0.702
AF-P54818-F1-model_v4 39 412 32 482 0.4878 0.6719
AF-K7KBX2-F1-model_v4 43 392 18 643 0.4874 0.6953
AF-A0A0D2D9G7-F1-model_v4 27 403 30 422 0.4496 0.5467
AF-Q9FG67-F1-model_v4 54 415 43 506 0.4424 0.5585
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0P0GGS8-F1-model_v4 CBM13 36 415 36 486 0.6462 0.981
A0A412I8S6 CBM13 36 415 36 486 0.6437 0.9771
AF-F9D483-F1-model_v4 CBM13 36 415 25 488 0.6418 0.9598
UKK60424.1 CBM13 37 415 28 498 0.6373 0.9592
BCM92694.1 CBM13 39 415 111 643 0.636 0.9285
AF-A0A6G8F131-F1-model_v4 CBM13 47 415 5 454 0.6276 0.958
AF-A0A518ARL3-F1-model_v4 CBM13 48 415 1 456 0.6226 0.9316
A0A1B8U690 CBM13 , CBM42 35 415 20 473 0.6026 0.9526
AF-A0A5C1ACY8-F1-model_v4 GH39 44 394 18 469 0.5996 0.7576
A0A1H8W8F4 CBM13 36 415 43 492 0.5942 0.9605
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A412I8S6 CBM13 36 415 36 486 0.6437 0.9771
F9D483 CBM13 36 415 25 488 0.6418 0.9598
UKK60424.1 CBM13 37 415 28 498 0.6373 0.9592
BCM92694.1 CBM13 39 415 111 643 0.636 0.9285
A0A6G8F131 CBM13 47 415 5 454 0.6276 0.958
A0A518ARL3 CBM13 48 415 1 456 0.6226 0.9316
G9IS16 GH30_5 31 392 18 486 0.619 0.7711
B6H9H4 GH39 47 392 28 469 0.6039 0.7718
A0A1B8U690 CBM13 , CBM42 35 415 20 473 0.6026 0.9526
A0A5C1ACY8 GH39 44 394 18 469 0.5996 0.7576
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4fmv-assembly1.cif.gz_A 52 390 1 384 0.6158 0.7367
3kl3-assembly4.cif.gz_D 54 391 1 368 0.6031 0.7084
3kl5-assembly4.cif.gz_D 52 391 1 366 0.603 0.7035
4uqc-assembly1.cif.gz_A 45 390 1 390 0.5944 0.7025
4uqa-assembly1.cif.gz_A 45 389 1 391 0.5924 0.7026
3kl3-assembly1.cif.gz_A 48 391 1 389 0.5915 0.7014
5a6m-assembly1.cif.gz_A 52 390 1 389 0.591 0.7096
7n6o-assembly2.cif.gz_B 52 390 1 428 0.5789 0.7285
4qaw-assembly5.cif.gz_E 48 396 1 502 0.5248 0.6976
4qaw-assembly2.cif.gz_B 51 396 1 506 0.5246 0.7047
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O07013-F1-model_v4 53 397 42 429 0.4922 0.6057
AF-Q9SG80-F1-model_v4 38 392 29 658 0.489 0.702
AF-P54818-F1-model_v4 39 412 32 482 0.4878 0.6719
AF-Q0CUG5-F1-model_v4 64 325 61 393 0.4847 0.7358
AF-Q9FG67-F1-model_v4 54 415 43 506 0.4424 0.5585
Download Full SwissProt Results