PROTEIN: Rep_450_c_0_1017
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Protein File & Metadata
Source:
Rep_450_c_0_1017.pdb
Genome ID:
Protein ID:
Rep_450_c_0_1017
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Protein Sequence
MKKYKLYWTL LTINAGLPLD KLVVFILSIL YYFQNSKSFR AKALVVFCIL FMLAFTSFIV 60 NADRNILIFY PFLFFFLAVL AGNAEANVKL IQNSLLVSIF WGIFSAILAL IGIHTIGSLS 120 LIEKGMPFLF APVGFSPTVQ VYGTLCVCWL IIAMETKQKR GWVFYLVLIA SILTFNRATW 180 IFLFLLLTIY HKKYAIGLFF IGVVIVSCIE LVQNVLFSIS TLSSRGELRA GAELSYWKSN 240 DFFVYLFGKG THLTSEKIAR HTIWGRQYIE NGWDFIFHTY GIIGFIVYTC IIISLLYVIW 300 RRGAGKFSIL IIYYYFVEQI LTNEFLASSF CFFTTIILIL SKKNNLSLSS KHILI 355
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 1 | 355 | 5 | 574 | 0.5827 |
0.7692 |
| AF-A0A1D9GRK7-F1-model_v4 | GT2 | 1 | 355 | 1 | 517 | 0.5814 |
0.7665 |
| AF-M1FGR5-F1-model_v4 | GT2 | 1 | 355 | 7 | 577 | 0.5787 |
0.7662 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 1 | 355 | 8 | 524 | 0.5696 |
0.7536 |
| AF-A0A160T1R3-F1-model_v4 | GH39 | 1 | 351 | 591 | 1042 | 0.5215 |
0.7918 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UII34295.1 | GT4 | 1 | 355 | 20 | 425 | 0.5664 |
0.7851 |
| B5L412 | GT2 | 1 | 355 | 10 | 484 | 0.5454 |
0.7232 |
| A0A517MXC4 | GT26 | 1 | 355 | 23 | 453 | 0.544 |
0.7446 |
| A0A160T1R3 | GH39 | 1 | 351 | 591 | 1042 | 0.5215 |
0.7918 |
| K2DNF3 | GT83 | 1 | 349 | 23 | 448 | 0.5197 |
0.7733 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.