PROTEIN: Rep_419_c_56_21
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Protein File & Metadata
Source:
Rep_419_c_56_21.pdb
Genome ID:
Protein ID:
Rep_419_c_56_21
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Protein Sequence
MIYSLIILMF GLMILGFICS DQNILAPSVI TSGVWLICLS LFLLLRHNLP QYSSQFVNCL 60 SIWAIGTTLS SLLLQSTSFK VMNSHASMTM RDIYLLISIL TFPLLLLWAY NALRSGVTDS 120 WTMNLRMTAI GRGVDKDMYD PIYLLIWEVS YGIELMYFEK KKWWRCALPA LFFLSYAFFT 180 MSKTYILSFF VFTVTFLLFK HKIKVWHLIL GVVGVLVLFV LMQSLRESYE MDNSDKNDFL 240 VLYLLSSMSA FDTLQPHSAV HWGENVFRVF YAIFYKLGLS DVEPINTILP FIHHPIVTNT 300 YTGMYPFFVD FGYWGIGVFA WIVGCFYGFL FRAVQLGSKY ALLLYAYFAH IILMQYVGDM 360 FFTNIAGVIK FALIALLPFL VEKYQLLYK 389
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q32EG1-F1-model_v4 | 1 | 385 | 1 | 378 | 0.8347 |
0.8674 |
| AF-P37748-F1-model_v4 | 1 | 388 | 1 | 388 | 0.782 |
0.8075 |
| AF-Q57862-F1-model_v4 | 17 | 383 | 6 | 349 | 0.7215 |
0.7966 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WBY64485.1 | GT4 | 1 | 389 | 34 | 468 | 0.5475 |
0.7673 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UVP94250.1 | GT4 | 1 | 389 | 5 | 448 | 0.5954 |
0.8116 |
| A0A6I5WLM1 | GT4 | 1 | 389 | 49 | 590 | 0.5717 |
0.8029 |
| WBY64485.1 | GT4 | 1 | 389 | 34 | 468 | 0.5475 |
0.7673 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q03584-F1-model_v4 | 16 | 385 | 16 | 378 | 0.791 |
0.8538 |
| AF-P37748-F1-model_v4 | 1 | 388 | 1 | 388 | 0.782 |
0.8075 |
| AF-B1LLW7-F1-model_v4 | 1 | 389 | 8 | 431 | 0.722 |
0.7963 |
| AF-Q57862-F1-model_v4 | 17 | 383 | 6 | 349 | 0.7215 |
0.7966 |
| AF-A4TRB5-F1-model_v4 | 1 | 389 | 8 | 431 | 0.7211 |
0.7974 |
| AF-Q8ZAF1-F1-model_v4 | 1 | 389 | 8 | 430 | 0.7206 |
0.7973 |
| AF-A7FD61-F1-model_v4 | 1 | 389 | 8 | 430 | 0.7201 |
0.7967 |
| AF-A9R8J0-F1-model_v4 | 1 | 389 | 8 | 430 | 0.7197 |
0.7962 |
| AF-B2VG51-F1-model_v4 | 1 | 389 | 8 | 431 | 0.7194 |
0.7978 |
| AF-B2K059-F1-model_v4 | 1 | 389 | 8 | 430 | 0.7184 |
0.7949 |