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PROTEIN: Rep_3001_c_29_26

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Protein File & Metadata
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Source:
Rep_3001_c_29_26.pdb
Genome ID:
Rep_3001
Protein ID:
Rep_3001_c_29_26

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKAILCLLL   CLLLLPTAVF   ADETPAPAQA   EGAAGTSAPA   ESAAPTESAA   PTATAAQEGT 60
FAILHTGDTH   GVRERSGDSI   GYPLLRSLAD   NTRSAYETLL   LDSGNALEGD   GLKTVKLMGA 120
ATYDAAAIGT   EDAALGIERL   QELSAIADFP   LLCANWLRQD   GELLFDPYAI   FEVDGVRIGV 180
IGLISPEIAE   LYPDITEGCN   VYKPSGIANI   YYEEMANAGC   TYFIALTSLG   YDGEYTPRDL 240
AAESPWLNLI   LDSNTDTVLE   DGELVPDTNV   VVFNLPKDFT   AVGSLVVTTT   SGQNILSPSV 300
LTLDDLSVLT   PNEAVTGVAQ   TDYSVDGESA   GGGLQIPAGA   VFLIALVVIA   GLTVLLVAVV 360
LRRKTPRK 368
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0V7Y3Q7-F1-model_v4 59 324 1 299 0.5535 0.8859
AF-Q2G1L5-F1-model_v4 58 323 1 297 0.5449 0.8673
AF-P44569-F1-model_v4 1 328 20 380 0.5421 0.7556
AF-A0A175WD23-F1-model_v4 56 325 38 335 0.54 0.8806
AF-Q9D3Z8-F1-model_v4 57 333 36 504 0.5362 0.867
AF-A0A077Z8G2-F1-model_v4 60 325 1 314 0.5314 0.8843
AF-C0NWY5-F1-model_v4 58 329 20 596 0.5014 0.8739
AF-Q2G253-F1-model_v4 58 332 146 750 0.4996 0.8987
AF-A0A0D2GW40-F1-model_v4 49 311 36 465 0.3779 0.6881
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A369XVP3 CBM50 39 327 24 336 0.5765 0.9014
AF-M1QBR7-F1-model_v4 CBM50 55 330 25 309 0.5763 0.9181
AF-A0A3P7P3V2-F1-model_v4 CBM50 1 329 12 308 0.5751 0.8658
A0A268S0W9 CBM50 57 329 26 312 0.5705 0.9252
AF-I0BU07-F1-model_v4 CBM50 56 335 44 585 0.5701 0.9232
AF-V9IRF3-F1-model_v4 CBM50 56 329 35 322 0.5689 0.9303
AF-A0A1D7XLJ6-F1-model_v4 CBM50 55 329 28 315 0.5682 0.9233
AF-H6NQR4-F1-model_v4 CBM50 56 330 44 333 0.5673 0.9315
AF-L0EIF6-F1-model_v4 CBM50 56 329 30 315 0.5655 0.9386
AF-F8FPR8-F1-model_v4 CBM50 56 329 44 332 0.5654 0.9325
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A369XVP3 CBM50 39 327 24 336 0.5765 0.9014
M1QBR7 CBM50 55 330 25 309 0.5763 0.9181
A0A3P7P3V2 CBM50 1 329 12 308 0.5751 0.8658
A0A268S0W9 CBM50 57 329 26 312 0.5705 0.9252
L0EIF6 CBM50 56 329 30 315 0.5655 0.9386
WDV47030.1 CBM50 56 327 30 313 0.563 0.9276
B2TP88 CBM50 57 328 30 314 0.563 0.9296
A8MEY8 CBM50 56 329 55 342 0.5611 0.9327
A0A378XV22 CBM50 57 335 45 624 0.5562 0.9234
WBW96195.1 CBM50 55 327 29 309 0.5545 0.9238
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3gve-assembly1.cif.gz_A 57 325 1 328 0.6879 0.8994
3jyf-assembly1.cif.gz_A 56 324 1 329 0.6789 0.8904
5eqv-assembly1.cif.gz_A 56 324 1 329 0.6765 0.8873
1ush-assembly1.cif.gz_A 53 327 1 324 0.5879 0.9136
1hp1-assembly1.cif.gz_A 53 327 1 325 0.5873 0.9133
4wwl-assembly1.cif.gz_A 53 327 1 334 0.5868 0.9187
2ush-assembly2.cif.gz_B 53 327 1 334 0.5862 0.9147
1oie-assembly1.cif.gz_A 53 327 1 328 0.5862 0.9132
2ush-assembly1.cif.gz_A 53 327 1 323 0.5856 0.9041
1oi8-assembly1.cif.gz_A 53 327 1 334 0.5853 0.9164
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P07024-F1-model_v4 45 326 15 358 0.5862 0.9106
AF-P06196-F1-model_v4 46 327 16 359 0.5831 0.9055
AF-A9BJC1-F1-model_v4 57 327 20 310 0.5818 0.9069
AF-Q9RN37-F1-model_v4 1 325 14 356 0.5797 0.7875
AF-Q8DFG4-F1-model_v4 2 325 18 359 0.5788 0.7909
AF-P22848-F1-model_v4 46 325 19 359 0.5777 0.9113
AF-Q9KQ30-F1-model_v4 2 325 18 359 0.577 0.7881
AF-Q56878-F1-model_v4 4 326 17 358 0.576 0.7874
AF-P44569-F1-model_v4 1 328 20 380 0.5421 0.7556
AF-B6EWW8-F1-model_v4 56 325 39 344 0.5408 0.8999
Download Full SwissProt Results