PROTEIN: Rep_254_c_37_4
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Protein File & Metadata
Source:
Rep_254_c_37_4.pdb
Genome ID:
Protein ID:
Rep_254_c_37_4
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Protein Sequence
MLLLLIGIGW LIVRAMPASE TELRRSTCYV DGNISVCLVS GKDTAVLTCD SVHQQGVWIN 60 RHWWLASCDG RVLTLSPSSK LQAFEVPALC DSLSSLLNRK ETERKELIYY LRSHGVIDEG 120 YTQIATYATR QSKMTDSLKV RLKELQRICP IDSDNTGKHF KLSKKSRLIL KADYCVKWYN 180 TSNKLKHVTC DPIVTPLTSK VSPLILHTHR SFKPWGVYAV RNVPWGATEH RKIVTVRLVP 240 TEQSAPFHSL IVSGKYWQGH NHDLPRLFAV DGAPVFTKHG RFIGIIHGKE VLQ 293
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2K9HC00-F1-model_v4 | GH25 | 1 | 271 | 15 | 269 | 0.4838 |
0.7335 |
| AF-A0A0K1NKZ3-F1-model_v4 | GH25 | 1 | 271 | 15 | 268 | 0.4734 |
0.7208 |
| AF-A0A250KL15-F1-model_v4 | GH25 | 1 | 271 | 15 | 268 | 0.4695 |
0.7145 |
| AF-A0A2D3L624-F1-model_v4 | GH25 | 1 | 272 | 15 | 267 | 0.4686 |
0.7185 |
| AF-A0A1B1IA15-F1-model_v4 | GH25 | 1 | 271 | 15 | 268 | 0.4681 |
0.7112 |
| AF-A0A2D3LS21-F1-model_v4 | GH25 | 1 | 271 | 15 | 264 | 0.4631 |
0.7166 |
| AF-A0A0S3UJF6-F1-model_v4 | GH25 | 1 | 272 | 15 | 264 | 0.4625 |
0.7166 |
| AF-A0A1P8JJV0-F1-model_v4 | GH25 | 1 | 272 | 15 | 264 | 0.462 |
0.7158 |
| AF-A0A2D3NDJ4-F1-model_v4 | GH25 | 1 | 272 | 15 | 264 | 0.4617 |
0.7143 |
| D8DXD7 | GH25 | 1 | 289 | 1 | 248 | 0.4597 |
0.7166 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2D3NDJ4 | GH25 | 1 | 272 | 15 | 264 | 0.4617 |
0.7143 |
| D8DXD7 | GH25 | 1 | 289 | 1 | 248 | 0.4597 |
0.7166 |
| A0A6N3E4Q6 | GH25 | 1 | 293 | 45 | 360 | 0.4486 |
0.6584 |
| A0A137SZY8 | GH25 | 1 | 269 | 12 | 264 | 0.4339 |
0.6597 |
| D1P9R4 | GH25 | 2 | 271 | 8 | 247 | 0.4275 |
0.6672 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.