PROTEIN: Rep_247_c_20_25
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Protein File & Metadata
Source:
Rep_247_c_20_25.pdb
Genome ID:
Protein ID:
Rep_247_c_20_25
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Protein Sequence
MSIVLLSILS MLSAFMQYVR NDYQPLDNQY AVFKGEHTGA ADERGVRTNA DLSMVAAFMG 60 EDSIALKTLA FAVHTHKAVR KRPCLDGRYW GSVSAKDYQW ESSLWAMSVA YSAYFQWQRL 120 PDSLKTDIYH LLKAECNYEL KRDIPTGYIG DTKAEENGWE VDVLAATLGL FPDDPLAPQW 180 FQRMRAFAIN SYSHPTDAQD TTVIDPDYDA TRVCDLYKGP NLYPDWTLQN HDFFHTSYQN 240 VVIQELGEAA LALRLFQGKR QRWASRALLH NCDKVTENVL NWLTLPDGEQ AMPNGNDWSL 300 FLYDQVTSYA TMACMQRNAD ALYFERQCLK RIAQRQQTTD DGSFLLRPDV GARRMGVQAH 360 RLLMTEMMHQ LWPTEDMRPT RWTDFERRYH GSKLFPCQQI VRTLTPRFFA CFSFSKGKKS 420 YTGYLAPIHD DMTDNLVIPY RQYNTGNIIG YYQPTTEKPN ARLVGEPTID IKGYYFMVKA 480 TLAENDGSIV RRFTLRSRAD GLEYSDNVKM KTADRLKDYT GLLAISADEF TGRNHQVDFQ 540 PGLTRIDNQL TVQSDSRVKA QWTKETIENS IRSKRLAPYE AGKPQTRHHI IYRID 595
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1S8HMP8-F1-model_v4 | 1 | 595 | 16 | 600 | 0.6752 |
0.7241 |
| AF-U7PW17-F1-model_v4 | 1 | 595 | 11 | 705 | 0.6583 |
0.7369 |
| AF-Q5RGL8-F1-model_v4 | 1 | 595 | 63 | 670 | 0.5532 |
0.6858 |
| AF-Q9UL01-F1-model_v4 | 1 | 595 | 61 | 669 | 0.551 |
0.6854 |
| AF-B5DF19-F1-model_v4 | 1 | 595 | 61 | 694 | 0.5103 |
0.6355 |
| AF-Q8BLI4-F1-model_v4 | 1 | 593 | 58 | 692 | 0.5095 |
0.635 |
| AF-D3ZYE3-F1-model_v4 | 1 | 595 | 74 | 681 | 0.5026 |
0.6753 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A975CX51 | PL37 | 1 | 595 | 2 | 586 | 0.753 |
0.7778 |
| AF-A0A7G8UMI7-F1-model_v4 | PL37 | 3 | 595 | 1 | 596 | 0.7487 |
0.7682 |
| AF-C6XTA3-F1-model_v4 | PL37 | 1 | 595 | 25 | 634 | 0.7356 |
0.7729 |
| AF-A0A172TXM4-F1-model_v4 | PL37 | 1 | 595 | 25 | 624 | 0.7336 |
0.7659 |
| AF-A0A7D4Q3L2-F1-model_v4 | PL37 | 1 | 595 | 37 | 636 | 0.7326 |
0.7704 |
| A0A7X9TCJ0 | PL37 | 1 | 595 | 38 | 642 | 0.7318 |
0.7736 |
| AF-A0A2R3MNC0-F1-model_v4 | PL37 | 1 | 595 | 27 | 632 | 0.7311 |
0.7675 |
| AF-A0A5B7SRM9-F1-model_v4 | PL37 | 1 | 595 | 35 | 636 | 0.728 |
0.767 |
| A0A413LPX4 | PL37 | 2 | 595 | 1 | 643 | 0.7227 |
0.7658 |
| AF-A0A1B2HPA4-F1-model_v4 | CBM32 | 1 | 568 | 33 | 579 | 0.7074 |
0.8067 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A975CX51 | PL37 | 1 | 595 | 2 | 586 | 0.753 |
0.7778 |
| A0A7G8UMI7 | PL37 | 3 | 595 | 1 | 596 | 0.7487 |
0.7682 |
| C6XTA3 | PL37 | 1 | 595 | 25 | 634 | 0.7356 |
0.7729 |
| C6Y378 | PL37 | 1 | 595 | 26 | 627 | 0.7353 |
0.769 |
| A0A3B7MN57 | PL37 | 1 | 595 | 38 | 638 | 0.7352 |
0.7752 |
| A0A7X9TCJ0 | PL37 | 1 | 595 | 38 | 642 | 0.7318 |
0.7736 |
| A0A415S2E7 | PL37 | 1 | 595 | 28 | 633 | 0.7312 |
0.7678 |
| A0A2Z5FTG3 | PL37 | 1 | 595 | 45 | 650 | 0.7253 |
0.7732 |
| A0A413LPX4 | PL37 | 2 | 595 | 1 | 643 | 0.7227 |
0.7658 |
| A0A518HT83 | PL37 | 1 | 595 | 43 | 654 | 0.7208 |
0.7696 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1ojo-assembly1.cif.gz_A | 1 | 595 | 21 | 631 | 0.6479 |
0.7221 |
| 1n7o-assembly1.cif.gz_A | 1 | 595 | 21 | 631 | 0.6474 |
0.7211 |
| 1n7q-assembly1.cif.gz_A | 1 | 595 | 21 | 631 | 0.6469 |
0.7209 |
| 1n7n-assembly1.cif.gz_A | 1 | 595 | 21 | 631 | 0.6464 |
0.7201 |
| 2brv-assembly1.cif.gz_X | 1 | 595 | 21 | 623 | 0.6447 |
0.7156 |
| 2wda-assembly1.cif.gz_A | 1 | 595 | 19 | 616 | 0.6444 |
0.7265 |
| 1rw9-assembly1.cif.gz_A | 1 | 595 | 23 | 628 | 0.6411 |
0.7268 |
| 1rwh-assembly1.cif.gz_A | 1 | 595 | 23 | 628 | 0.6409 |
0.7268 |
| 2x03-assembly1.cif.gz_A | 1 | 595 | 18 | 616 | 0.6295 |
0.7109 |
| 6hzn-assembly1.cif.gz_A | 1 | 595 | 38 | 645 | 0.6047 |
0.6844 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-T2KMH5-F1-model_v4 | 1 | 595 | 34 | 638 | 0.7343 |
0.774 |
| AF-P0CZ01-F1-model_v4 | 1 | 595 | 23 | 663 | 0.6018 |
0.7039 |
| AF-Q9UL01-F1-model_v4 | 1 | 595 | 61 | 669 | 0.551 |
0.6854 |
| AF-P0C2H4-F1-model_v4 | 1 | 595 | 58 | 669 | 0.5195 |
0.6463 |
| AF-Q8BLI4-F1-model_v4 | 1 | 593 | 58 | 692 | 0.5095 |
0.635 |