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PROTEIN: Rep_2185_c_0_1090

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Protein File & Metadata
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Source:
Rep_2185_c_0_1090.pdb
Genome ID:
Rep_2185
Protein ID:
Rep_2185_c_0_1090

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Detailed structural information will appear here after analysis...

Protein Sequence 
MDMKKRSFKK   LITLSLTLAM   LTGVAGCGKQ   QSLNAETNPD   TPVSDVQFPL   KEKAELSFIT 60
SAPATSTQDP   NERTIFKRME   KQTNVHIDWT   CFVSDQFSDK   KNLALAQFGN   LPDGLFNAGM 120
SDYDLLRYAK   QGIIIPVENL   IDKYMPNLQA   VFEKYPEYRT   MCTAPDGHIY   SFPWIEQLGA 180
GKEAIQAIGD   IPYINKKWLD   YLGLEVPTTT   DELEQVLIAF   RDHADELEKE   FDIEGGVIPM 240
SFIINNGDKD   PAILMNGFGE   GYGDTGDHFA   VTDEGKVIYA   PTQEGYKEGI   EWLHKLVTED 300
LIDPEAFTQE   WSTYVAKGKN   HRYGLCFTWD   IANIDNNTDY   VMLPALTGPD   GVRNITRQNN 360
SETSGFDRGR   CVLTSSCRDT   ALAAAWIDQM   YAPIQSPQNN   WGTYGEKDSF   NIFEMSTNAD 420
GGQMLKHMDL   GDQSPVEVRE   AQSVNGPLAV   LNDYYDVYVT   EPADAKWRLD   NMHEAYLKDM 480
NSKYVYPNVF   MSIDDTNKVS   QYDTDIKKYA   EQKKADWILN   GGIDKEWDSY   LKKLNKYGLQ 540
DYLKIKQKYF   DSYQKSLEST   SEGK 564
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 1 556 4 502 0.6805 0.7441
AF-A0A133D019-F1-model_v4 15 556 13 485 0.666 0.7495
AF-Q8DRJ6-F1-model_v4 16 558 32 514 0.6252 0.7122
AF-Q8DNU2-F1-model_v4 37 545 26 445 0.611 0.7347
AF-A0A133CPC5-F1-model_v4 49 542 30 423 0.6074 0.7535
AF-K0F7X1-F1-model_v4 33 542 27 409 0.6035 0.7555
AF-A0A133CDW9-F1-model_v4 9 545 9 444 0.6001 0.6979
AF-Q8DNU8-F1-model_v4 10 545 4 440 0.597 0.6914
AF-K0F002-F1-model_v4 27 545 34 439 0.5967 0.7344
AF-A0A132ZDH4-F1-model_v4 50 538 26 427 0.5796 0.7107
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 38 556 35 506 0.7137 0.8192
AF-A0A7U1BNH7-F1-model_v4 GH10 51 551 27 745 0.4746 0.6082
A0A9Q8PNJ5 GH4 2 545 155 866 0.4707 0.5943
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 38 556 35 506 0.7137 0.8192
A0A7U1BNH7 GH10 51 551 27 745 0.4746 0.6082
A0A9Q8PNJ5 GH4 2 545 155 866 0.4707 0.5943
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5g62-assembly2.cif.gz_B 54 558 1 491 0.9122 0.9799
5g5y-assembly1.cif.gz_A 51 560 1 494 0.8186 0.8867
5xs8-assembly1.cif.gz_A 53 550 1 474 0.7928 0.8724
6fth-assembly1.cif.gz_A 51 556 1 496 0.7925 0.8568
4tqu-assembly1.cif.gz_Q 46 558 3 492 0.7866 0.8572
3omb-assembly1.cif.gz_A 34 555 1 503 0.7863 0.8451
5h6u-assembly1.cif.gz_A 47 555 1 487 0.7825 0.854
3vlw-assembly2.cif.gz_B 46 554 1 489 0.7808 0.8507
6jhx-assembly2.cif.gz_B 46 552 2 483 0.7794 0.8549
5suo-assembly1.cif.gz_A 53 555 1 451 0.6842 0.7761
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 32 560 28 538 0.8344 0.9098
AF-P37966-F1-model_v4 44 555 30 502 0.7068 0.806
AF-Q795R2-F1-model_v4 17 555 3 498 0.6571 0.7208
AF-Q8FVS7-F1-model_v4 51 545 22 411 0.6376 0.7865
AF-Q578M8-F1-model_v4 51 545 22 411 0.6368 0.7857
AF-Q2YKZ9-F1-model_v4 51 545 22 411 0.6364 0.7852
AF-A0A0H2UMY0-F1-model_v4 13 558 18 491 0.6218 0.706
AF-Q7LYW7-F1-model_v4 47 545 38 450 0.6118 0.7499
AF-O07009-F1-model_v4 40 545 27 420 0.6102 0.7547
AF-A0QXD9-F1-model_v4 19 545 30 477 0.6077 0.7137
Download Full SwissProt Results