PROTEIN: Rep_2178_c_9_62
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
Rep_2178_c_9_62.pdb
Genome ID:
Protein ID:
Rep_2178_c_9_62
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MKKKIVSTLL CAAMVATMMA GCGGNNTSTN TGSNSSADAS ASTDNSAPAT EAEAKDDAKE 60 ETASTGDEGK VLNIYCWNEE FKSRITDHYP GYTETDATTG TIGDVTVKWN ITPNDDNAYQ 120 NNLDATLLKQ ADAAADDKID LFLVEADYAL KYVDTDYTMP VTDLGITDAD LANQYQYTKD 180 IVTDSNGVLK GVSWQGCPGV LFYNREAAKE VLGSDDPAEV QKYVVDWDTF NDTAKTMKDA 240 GYNMTSSVND TYRVYSNNVS SKWVEDGKIN IDENIMKWVD DSKELVDAGE TGTHELWSDD 300 WSKGFYPEGK VFCYFGPAWL VNFSMAADTE GSIGNQGGWG ATEGPQGFFW GGTWICAAQG 360 TDNPGLVKDI MLQMTTNEDV MKDIVVKDDD FVNNKPVMEE MAADTSYSSK ILGGQNPLGI 420 YCSGVANLDL SNLSAYDQGC NEEFQNAMKN YFEGNATKDE ALDLFYTAVE EKYPELTH 478
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DRJ6-F1-model_v4 | 5 | 478 | 28 | 499 | 0.5358 |
0.5817 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 67 | 474 | 1 | 393 | 0.791 |
0.8814 |
| 8bfy-assembly1.cif.gz_A | 69 | 475 | 1 | 393 | 0.746 |
0.8355 |
| 3uor-assembly2.cif.gz_B | 68 | 477 | 1 | 388 | 0.7385 |
0.8369 |
| 6x84-assembly2.cif.gz_B | 67 | 477 | 1 | 411 | 0.7333 |
0.8063 |
| 7vfq-assembly1.cif.gz_A | 68 | 478 | 1 | 394 | 0.7316 |
0.8181 |
| 7c0k-assembly1.cif.gz_A | 68 | 476 | 14 | 396 | 0.7309 |
0.839 |
| 7vfq-assembly2.cif.gz_B | 68 | 478 | 1 | 396 | 0.7306 |
0.8151 |
| 7c0x-assembly2.cif.gz_B | 68 | 476 | 13 | 395 | 0.7304 |
0.8375 |
| 2z8d-assembly2.cif.gz_B | 64 | 478 | 1 | 399 | 0.7303 |
0.8126 |
| 2z8d-assembly1.cif.gz_A | 65 | 478 | 1 | 401 | 0.7299 |
0.8106 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29822-F1-model_v4 | 67 | 475 | 26 | 422 | 0.7415 |
0.8478 |
| AF-D4GP35-F1-model_v4 | 16 | 478 | 13 | 459 | 0.6452 |
0.695 |
| AF-P58300-F1-model_v4 | 45 | 476 | 17 | 434 | 0.6438 |
0.7176 |
| AF-Q9V297-F1-model_v4 | 34 | 476 | 38 | 453 | 0.6331 |
0.7219 |