PROTEIN: Rep_2178_c_4_23
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
Rep_2178_c_4_23.pdb
Genome ID:
Protein ID:
Rep_2178_c_4_23
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MKRRIVSMML TVAMGATLLA GCGNSAGGNN AADAAGTAGT ESAQANTAVS GEEGSVINIY 60 SWNDEFRERL EAVYPEVEST SSDGTVTKLK DGTEIHWIIN PNQDGVYQQK LDEALMNQAT 120 AADDDKVDIF LSETDYVFKY TDKDANVAMP LTDLGIDPEK ELADQYDFTR TTASDSDGVQ 180 RGSTWQCCPG LLVYRRDIAT DVFGTDDPEA VGEKVKDWDT IKQTAEELKA KGYYTFSSYA 240 DTFRLYGNSI SESWVQPGSS TLKVDQKIMD WVNDSKDWLD AGYVDANIKG QWNDDWNKAM 300 GSQSKVFAFL FPAWGIDFTL SPNWDGEEGS WAVTNPPQEY NWGGSYIHAA VGTDNAQHAK 360 DIILAMTANK DNLLSISKNY SDFTNTKSGM QEAADDDATY ASDFLGGQNP FTYFAPVAEN 420 IQIAPLSAYD QGCVELIQNS FSDYLQGNVE YDKAKENFET AIKERYPDIT EVVWPE 476
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F002-F1-model_v4 | 30 | 469 | 27 | 439 | 0.7213 |
0.8097 |
| AF-A0A133CKQ7-F1-model_v4 | 22 | 470 | 12 | 419 | 0.6803 |
0.7581 |
| AF-Q5F6Q5-F1-model_v4 | 45 | 449 | 32 | 380 | 0.5854 |
0.7198 |
| AF-Q8DRJ6-F1-model_v4 | 16 | 475 | 30 | 503 | 0.5373 |
0.5961 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1Q2TKJ3 | GH49 | 11 | 470 | 156 | 797 | 0.5399 |
0.7029 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 52 | 469 | 1 | 393 | 0.8084 |
0.8979 |
| 3uor-assembly2.cif.gz_B | 55 | 471 | 1 | 389 | 0.7462 |
0.8417 |
| 6hus-assembly1.cif.gz_A | 42 | 476 | 1 | 428 | 0.7402 |
0.7982 |
| 6x84-assembly2.cif.gz_B | 53 | 470 | 1 | 412 | 0.7353 |
0.8059 |
| 8bfy-assembly1.cif.gz_A | 55 | 468 | 2 | 393 | 0.7342 |
0.825 |
| 7vfq-assembly2.cif.gz_B | 54 | 474 | 1 | 396 | 0.7326 |
0.817 |
| 7vfr-assembly1.cif.gz_A | 54 | 474 | 1 | 397 | 0.7316 |
0.8149 |
| 7vfq-assembly4.cif.gz_D | 54 | 474 | 1 | 397 | 0.7316 |
0.815 |
| 2z8d-assembly2.cif.gz_B | 50 | 473 | 1 | 399 | 0.7315 |
0.8132 |
| 7vfq-assembly1.cif.gz_A | 54 | 474 | 1 | 394 | 0.7309 |
0.8168 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P94528-F1-model_v4 | 53 | 471 | 32 | 433 | 0.7543 |
0.8606 |
| AF-Q926H8-F1-model_v4 | 53 | 471 | 20 | 429 | 0.6845 |
0.7702 |
| AF-Q8UB32-F1-model_v4 | 53 | 471 | 26 | 436 | 0.6733 |
0.7612 |
| AF-P59214-F1-model_v4 | 29 | 472 | 6 | 423 | 0.6703 |
0.7352 |
| AF-Q7LYW7-F1-model_v4 | 52 | 472 | 42 | 449 | 0.6689 |
0.7704 |
| AF-P59213-F1-model_v4 | 50 | 472 | 36 | 423 | 0.664 |
0.7789 |
| AF-P55601-F1-model_v4 | 52 | 473 | 35 | 430 | 0.6631 |
0.7716 |
| AF-O34335-F1-model_v4 | 54 | 470 | 30 | 418 | 0.6602 |
0.7746 |
| AF-O58758-F1-model_v4 | 52 | 471 | 44 | 420 | 0.6336 |
0.7602 |
| AF-P55454-F1-model_v4 | 52 | 447 | 44 | 358 | 0.6237 |
0.8133 |